Input
| Putative repression domain
|
|
AT4G00200.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt039991 |
not found in 325aa |
AT4G12080.1 |
1st_not |
0.46484375 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT4G00200.1 METSDRISPG-GGIGAEVPSAYHMAPRPSDSPANQFMGLSLPPMEAPMPSSGEASG---K
pt039991_POPTR_ MEGREGLSAGVTVIGAEAPSNYHVAPR-TENPG-QFV-VSPPAVEVPPVGAGLTGGTTEK
** : :*.* ****.** **:*** ::.*. **: :* *.:*.* .:* :.* *
AT4G00200.1 KRRGRPRKYEANGA------PLP-SSSVPL----VKKRVRGKL-NGFDMKKMHKTIGFHS
pt039991_POPTR_ KKRGRPRKYGPDGAVARALSPMPISASAPSPGGDYSAGKPGKVWPGSYEKKKYKKLGMEN
*:******* .:** *:* *:*.* . **: * ** :*.:*:..
AT4G00200.1 SGERFGVGGGVGGGVGSNFTPHVITVNTGEDITMRIISFSQQGPRAICILSANGVISNVT
pt039991_POPTR_ LGE------WAANSVGTNFTPHVITVNAGEDVTMKVISFSQQGPRAICILSANGVISNVT
** ....**:**********:***:**::************************
AT4G00200.1 LRQPDSCGGTLTYEGRFEILSLSGSFMETENQGSKGRSGGMSVSLAGPDGRVVGGGVAGL
pt039991_POPTR_ LRQPDSSGGTLTYEGRFEILSLSGSFMPTESQGTRSRSGGMSVSLASPDGRVVGGSVAGL
******.******************** **.**::.**********.********.****
AT4G00200.1 LIAATPIQVVVGSFITSDQQDHQKPRKQRVEHAPAAVMSVPPPPSPPPPAA----SVFSP
pt039991_POPTR_ LVAASPVQVVVGSFLAGNHQD-QKPKKPKIDSIPA---TFAPAPVIPVSIAEREESVGTP
*:**:*:*******::.::** ***:* ::: ** :..*.* * . * ** :*
AT4G00200.1 TNPDREQPPSSFGISSWTNGQDMP--RNSATDINISLPVD
pt039991_POPTR_ HG--QQQNSSSFQRENWATMHSMQDVRNSVTDINISLPEG
. ::* .*** ..*:. :.* ***.******** .
BoxShade v3.31 C (beta, 970507) Output
AT4G00200.1 |
M |
E |
T |
S |
D |
R |
I |
S |
P |
G |
- |
G |
G |
I |
G |
A |
E |
V |
P |
S |
A |
Y |
H |
M |
A |
P |
R |
P |
S |
D |
S |
P |
A |
N |
Q |
F |
M |
G |
L |
S |
L |
P |
P |
M |
E |
A |
P |
M |
P |
S |
S |
G |
E |
A |
S |
G |
- |
- |
- |
K |
pt039991_POPTR_ |
M |
E |
G |
R |
E |
G |
L |
S |
A |
G |
V |
T |
V |
I |
G |
A |
E |
A |
P |
S |
N |
Y |
H |
V |
A |
P |
R |
- |
T |
E |
N |
P |
G |
- |
Q |
F |
V |
- |
V |
S |
P |
P |
A |
V |
E |
V |
P |
P |
V |
G |
A |
G |
L |
T |
G |
G |
T |
T |
E |
K |
|
AT4G00200.1 |
K |
R |
R |
G |
R |
P |
R |
K |
Y |
E |
A |
N |
G |
A |
- |
- |
- |
- |
- |
- |
P |
L |
P |
- |
S |
S |
S |
V |
P |
L |
- |
- |
- |
- |
V |
K |
K |
R |
V |
R |
G |
K |
L |
- |
N |
G |
F |
D |
M |
K |
K |
M |
H |
K |
T |
I |
G |
F |
H |
S |
pt039991_POPTR_ |
K |
K |
R |
G |
R |
P |
R |
K |
Y |
G |
P |
D |
G |
A |
V |
A |
R |
A |
L |
S |
P |
M |
P |
I |
S |
A |
S |
A |
P |
S |
P |
G |
G |
D |
Y |
S |
A |
G |
K |
P |
G |
K |
V |
W |
P |
G |
S |
Y |
E |
K |
K |
K |
Y |
K |
K |
L |
G |
M |
E |
N |
|
AT4G00200.1 |
S |
G |
E |
R |
F |
G |
V |
G |
G |
G |
V |
G |
G |
G |
V |
G |
S |
N |
F |
T |
P |
H |
V |
I |
T |
V |
N |
T |
G |
E |
D |
I |
T |
M |
R |
I |
I |
S |
F |
S |
Q |
Q |
G |
P |
R |
A |
I |
C |
I |
L |
S |
A |
N |
G |
V |
I |
S |
N |
V |
T |
pt039991_POPTR_ |
L |
G |
E |
- |
- |
- |
- |
- |
- |
W |
A |
A |
N |
S |
V |
G |
T |
N |
F |
T |
P |
H |
V |
I |
T |
V |
N |
A |
G |
E |
D |
V |
T |
M |
K |
V |
I |
S |
F |
S |
Q |
Q |
G |
P |
R |
A |
I |
C |
I |
L |
S |
A |
N |
G |
V |
I |
S |
N |
V |
T |
|
AT4G00200.1 |
L |
R |
Q |
P |
D |
S |
C |
G |
G |
T |
L |
T |
Y |
E |
G |
R |
F |
E |
I |
L |
S |
L |
S |
G |
S |
F |
M |
E |
T |
E |
N |
Q |
G |
S |
K |
G |
R |
S |
G |
G |
M |
S |
V |
S |
L |
A |
G |
P |
D |
G |
R |
V |
V |
G |
G |
G |
V |
A |
G |
L |
pt039991_POPTR_ |
L |
R |
Q |
P |
D |
S |
S |
G |
G |
T |
L |
T |
Y |
E |
G |
R |
F |
E |
I |
L |
S |
L |
S |
G |
S |
F |
M |
P |
T |
E |
S |
Q |
G |
T |
R |
S |
R |
S |
G |
G |
M |
S |
V |
S |
L |
A |
S |
P |
D |
G |
R |
V |
V |
G |
G |
S |
V |
A |
G |
L |
|
AT4G00200.1 |
L |
I |
A |
A |
T |
P |
I |
Q |
V |
V |
V |
G |
S |
F |
I |
T |
S |
D |
Q |
Q |
D |
H |
Q |
K |
P |
R |
K |
Q |
R |
V |
E |
H |
A |
P |
A |
A |
V |
M |
S |
V |
P |
P |
P |
P |
S |
P |
P |
P |
P |
A |
A |
- |
- |
- |
- |
S |
V |
F |
S |
P |
pt039991_POPTR_ |
L |
V |
A |
A |
S |
P |
V |
Q |
V |
V |
V |
G |
S |
F |
L |
A |
G |
N |
H |
Q |
D |
- |
Q |
K |
P |
K |
K |
P |
K |
I |
D |
S |
I |
P |
A |
- |
- |
- |
T |
F |
A |
P |
A |
P |
V |
I |
P |
V |
S |
I |
A |
E |
R |
E |
E |
S |
V |
G |
T |
P |
|
AT4G00200.1 |
T |
N |
P |
D |
R |
E |
Q |
P |
P |
S |
S |
F |
G |
I |
S |
S |
W |
T |
N |
G |
Q |
D |
M |
P |
- |
- |
R |
N |
S |
A |
T |
D |
I |
N |
I |
S |
L |
P |
V |
D |
pt039991_POPTR_ |
H |
G |
- |
- |
Q |
Q |
Q |
N |
S |
S |
S |
F |
Q |
R |
E |
N |
W |
A |
T |
M |
H |
S |
M |
Q |
D |
V |
R |
N |
S |
V |
T |
D |
I |
N |
I |
S |
L |
P |
E |
G |
|
|