fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00870.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm017529 not found in 437aa AT4G00870.1 1st_1st 0.340175953 Ib
Pt040165 not found in 491aa AT4G00870.1 1st_1st 0.356304985 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G00870.1     MYNLTFSPSLSSSLLSFTQQTPAAIVSSSPPDLVLQQKLRFVVETSPDRWAYVIFWQKMF
pt040165_POPTR_ MEELIISPSSPSSPVSLSQETP----------PTLQQRLQFIVQNQPDWWSYAIFWQTSN
gm017529_Glyma0 MEDLIISPSSSSSLVSLPHENPT-------PTPTLLQKLQFLLQSQPDWWVYAIFWQASH
                * :* :*** .** :*:.::.*           .* *:*:*:::..** * *.****   

AT4G00870.1     DDQSDRSYLVWVDGHFCGNKNNNSQENYTTN-SI--------------------ECE---
pt040165_POPTR_ DD-SGRIFLGWGDGHFQGSKDTSPKPNTFSNSRMTISNSERKRVMMKGIQSLIGECHDLD
gm017529_Glyma0 DD-NGNLYLSFGEGHFQGTKETSPK-------SLTIPTKKFMRAPTN-------------
                ** ... :* : :*** *.*:...:        :                          

AT4G00870.1     -LMMDGGD--DLELFYAASF-----------YGEDRSPRKEVSDESLVWLTGPDELRFSN
pt040165_POPTR_ MSLMDGNDATDSEWFYVMSLTRSF-------SPGDGILGKAYTTGSLIWLTGGHELQFYN
gm017529_Glyma0 ----DTNNINDAEWFYVVSLTRTFAVNNNASSSSSSLPGKSFALGSVLWLNNMHELQFYN
                    * .:  * * **. *:              .    *  :  *::**.. .**:* *

AT4G00870.1     YERAKEAGFHGVHTLVSIPINNGIIELGSSESIIQNRNFINRVKSIFGSG----------
pt040165_POPTR_ CERVKEAQMHGIETLVCIPTSCGVLELGSSSVIRENWGLVQQAKSLFGSDLSAYLVPKGP
gm017529_Glyma0 CERSNEAQVHGIETLICIPTQNGVVEMGSYDTIKQNWNLVQHVKSLF-------ITPPDP
                 ** :** .**:.**:.** . *::*:** . * :* .::::.**:*             

AT4G00870.1     ------------KTT---------------------KHTNQTGSYPK-----PAV----S
pt040165_POPTR_ NNSSEEPTQFLDRSISFADMGIIAGLQEDCAVDREQKNARETEEANKRNANKPGLSYLNS
gm017529_Glyma0 ------------RRI----------------------NQTQTQKPPRKNDN-----YVNS
                            :                        :  :* .  :            *

AT4G00870.1     DHSKSGNQQF--------GSERKRRRKLETTRVAAATKEKHHPAVLSHVEAEKQRREKLN
pt040165_POPTR_ EHSDSDFPLL--AMHMEKRIPKKRGRKPGLGRDAP----------LNHVEAERQRREKLN
gm017529_Glyma0 EHSDSDCPTLPTATTPTTSEPKKRGRKPILGRETP----------VNHVEAERQRREKLN
                :**.*.   :           :** **    * :.          :.*****:*******

AT4G00870.1     HRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETE-----IKKMKMTETDKLD
pt040165_POPTR_ HRFYALRAVVPNVSRMDKASLLSDAVSYINELKAKVDELESQLERE-SKKVKLEVADNLD
gm017529_Glyma0 HRFYALRAVVPNVSRMDKASLLSDAVAYISELKAKIEYLESQQPRDSSKKVKTEMTDTLD
                ********:**:**************:**..**:*:: **::      **:*   :*.**

AT4G00870.1     NSSSNTSPSSVEYQVNQKPS-KSNRGSDLEVQVKIVGEEAIIRVQTENVNHPTSALMSAL
pt040165_POPTR_ NQSTT---TSVD-QSACRPNSAGGAGLALEVEIKFVGNDAMIRVQSENVNYPASRLMCAL
gm017529_Glyma0 NHSTTTISTVVD-QSGPEPR-LGPSPLGLEVDVKIVGPDAMVRVQSENVNHPGARLMGAL
                * *:.   : *: *   .*   .     ***::*:** :*::***:****:* : ** **

AT4G00870.1     MEMDCRVQHANASRLSQVMVQDVVVLVPEGLRSEDRLRTTLVRTLSL
pt040165_POPTR_ RELEFQVHHASMSCVNELMLQDVVVRVPDGLRTEEALKSALLGRLE-
gm017529_Glyma0 RDLEFQVHHASMSCVNDLMLQDVVVKLPNGMRSEEGLKSAILMRLDQ
                 ::: :*:**. * :.::*:***** :*:*:*:*: *:::::  *.
BoxShade v3.31 C (beta, 970507) Output
AT4G00870.1     M Y N L T F S P S L S S S L L S F T Q Q T P A A I V S S S P P D L V L Q Q K L R F V V E T S P D R W A Y V I F W Q K M F
pt040165_POPTR_    M E E L I I S P S S P S S P V S L S Q E T P - - - - - - - - - - P T L Q Q R L Q F I V Q N Q P D W W S Y A I F W Q T S N
gm017529_Glyma0    M E D L I I S P S S S S S L V S L P H E N P T - - - - - - - P T P T L L Q K L Q F L L Q S Q P D W W V Y A I F W Q A S H
 
AT4G00870.1     D D Q S D R S Y L V W V D G H F C G N K N N N S Q E N Y T T N - S I - - - - - - - - - - - - - - - - - - - - E C E - - -
pt040165_POPTR_    D D - S G R I F L G W G D G H F Q G S K D T S P K P N T F S N S R M T I S N S E R K R V M M K G I Q S L I G E C H D L D
gm017529_Glyma0    D D - N G N L Y L S F G E G H F Q G T K E T S P K - - - - - - - S L T I P T K K F M R A P T N - - - - - - - - - - - - -
 
AT4G00870.1     - L M M D G G D - - D L E L F Y A A S F - - - - - - - - - - - Y G E D R S P R K E V S D E S L V W L T G P D E L R F S N
pt040165_POPTR_    M S L M D G N D A T D S E W F Y V M S L T R S F - - - - - - - S P G D G I L G K A Y T T G S L I W L T G G H E L Q F Y N
gm017529_Glyma0    - - - - D T N N I N D A E W F Y V V S L T R T F A V N N N A S S S S S S L P G K S F A L G S V L W L N N M H E L Q F Y N
 
AT4G00870.1     Y E R A K E A G F H G V H T L V S I P I N N G I I E L G S S E S I I Q N R N F I N R V K S I F G S G - - - - - - - - - -
pt040165_POPTR_    C E R V K E A Q M H G I E T L V C I P T S C G V L E L G S S S V I R E N W G L V Q Q A K S L F G S D L S A Y L V P K G P
gm017529_Glyma0    C E R S N E A Q V H G I E T L I C I P T Q N G V V E M G S Y D T I K Q N W N L V Q H V K S L F - - - - - - - I T P P D P
 
AT4G00870.1     - - - - - - - - - - - - K T T - - - - - - - - - - - - - - - - - - - - - K H T N Q T G S Y P K - - - - - P A V - - - - S
pt040165_POPTR_    N N S S E E P T Q F L D R S I S F A D M G I I A G L Q E D C A V D R E Q K N A R E T E E A N K R N A N K P G L S Y L N S
gm017529_Glyma0    - - - - - - - - - - - - R R I - - - - - - - - - - - - - - - - - - - - - - N Q T Q T Q K P P R K N D N - - - - - Y V N S
 
AT4G00870.1     D H S K S G N Q Q F - - - - - - - - G S E R K R R R K L E T T R V A A A T K E K H H P A V L S H V E A E K Q R R E K L N
pt040165_POPTR_    E H S D S D F P L L - - A M H M E K R I P K K R G R K P G L G R D A P - - - - - - - - - - L N H V E A E R Q R R E K L N
gm017529_Glyma0    E H S D S D C P T L P T A T T P T T S E P K K R G R K P I L G R E T P - - - - - - - - - - V N H V E A E R Q R R E K L N
 
AT4G00870.1     H R F Y A L R A I V P K V S R M D K A S L L S D A V S Y I E S L K S K I D D L E T E - - - - - I K K M K M T E T D K L D
pt040165_POPTR_    H R F Y A L R A V V P N V S R M D K A S L L S D A V S Y I N E L K A K V D E L E S Q L E R E - S K K V K L E V A D N L D
gm017529_Glyma0    H R F Y A L R A V V P N V S R M D K A S L L S D A V A Y I S E L K A K I E Y L E S Q Q P R D S S K K V K T E M T D T L D
 
AT4G00870.1     N S S S N T S P S S V E Y Q V N Q K P S - K S N R G S D L E V Q V K I V G E E A I I R V Q T E N V N H P T S A L M S A L
pt040165_POPTR_    N Q S T T - - - T S V D - Q S A C R P N S A G G A G L A L E V E I K F V G N D A M I R V Q S E N V N Y P A S R L M C A L
gm017529_Glyma0    N H S T T T I S T V V D - Q S G P E P R - L G P S P L G L E V D V K I V G P D A M V R V Q S E N V N H P G A R L M G A L
 
AT4G00870.1     M E M D C R V Q H A N A S R L S Q V M V Q D V V V L V P E G L R S E D R L R T T L V R T L S L
pt040165_POPTR_    R E L E F Q V H H A S M S C V N E L M L Q D V V V R V P D G L R T E E A L K S A L L G R L E -
gm017529_Glyma0    R D L E F Q V H H A S M S C V N D L M L Q D V V V K L P N G M R S E E G L K S A I L M R L D Q
 
0