fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G00870.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm017529 not found in 437aa AT4G00870.1 1st_1st 0.340175953 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G00870.1     MYNLTFSPSLSSSLLSFTQQTPAAIVSSSPPDLVLQQKLRFVVETSPDRWAYVIFWQKMF
gm017529_Glyma0 MEDLIISPSSSSSLVSLPHENPT-------PTPTLLQKLQFLLQSQPDWWVYAIFWQASH
                * :* :*** ****:*:.::.*:       *  .* ***:*::::.** *.*.****  .

AT4G00870.1     DDQSDRSYLVWVDGHFCGNKNNNSQE------------NYTTNSIECELMMDGGDDLELF
gm017529_Glyma0 DDNGNL-YLSFGEGHFQGTKETSPKSLTIPTKKFMRAPTNDTNNI---------NDAEWF
                **:.:  ** : :*** *.*:...:.            .  **.*         :* * *

AT4G00870.1     YAASFY-----------GEDRSPRKEVSDESLVWLTGPDELRFSNYERAKEAGFHGVHTL
gm017529_Glyma0 YVVSLTRTFAVNNNASSSSSSLPGKSFALGSVLWLNNMHELQFYNCERSNEAQVHGIETL
                *..*:            ...  * *..:  *::**.. .**:* * **::** .**:.**

AT4G00870.1     VSIPINNGIIELGSSESIIQNRNFINRVKSIFGSGKTTKHTNQTGSYPKPAVSD------
gm017529_Glyma0 ICIPTQNGVVEMGSYDTIKQNWNLVQHVKSLFITPPDPRRINQTQTQKPPRKNDNYVNSE
                :.** :**::*:** ::* ** *::::***:* :   .:: *** :   *  .*      

AT4G00870.1     HSKSGNQQFGSERKRRRKLETTRVAAATKEKHHPAVL------SHVEAEKQRREKLNHRF
gm017529_Glyma0 HSDSDCPTLPT--------ATTPTTSEPKKRGRKPILGRETPVNHVEAERQRREKLNHRF
                **.*.   : :         ** .:: .*:: : .:*      .*****:**********

AT4G00870.1     YALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETE-----IKKMKMTETDKLDNSS
gm017529_Glyma0 YALRAVVPNVSRMDKASLLSDAVAYISELKAKIEYLESQQPRDSSKKVKTEMTDTLDNHS
                *****:**:**************:**..**:**: **::      **:*   **.*** *

AT4G00870.1     SNTSPSSVEYQVNQKPSKSNRGSDLEVQVKIVGEEAIIRVQTENVNHPTSALMSALMEMD
gm017529_Glyma0 T-TTISTVVDQSGPEPRLGPSPLGLEVDVKIVGPDAMVRVQSENVNHPGARLMGALRDLE
                : *: *:*  * . :*  .    .***:***** :*::***:****** : **.** :::

AT4G00870.1     CRVQHANASRLSQVMVQDVVVLVPEGLRSEDRLRTTLVRTLSL
gm017529_Glyma0 FQVHHASMSCVNDLMLQDVVVKLPNGMRSEEGLKSAILMRLDQ
                 :*:**. * :.::*:***** :*:*:***: *:::::  *.
BoxShade v3.31 C (beta, 970507) Output
AT4G00870.1     M Y N L T F S P S L S S S L L S F T Q Q T P A A I V S S S P P D L V L Q Q K L R F V V E T S P D R W A Y V I F W Q K M F
gm017529_Glyma0    M E D L I I S P S S S S S L V S L P H E N P T - - - - - - - P T P T L L Q K L Q F L L Q S Q P D W W V Y A I F W Q A S H
 
AT4G00870.1     D D Q S D R S Y L V W V D G H F C G N K N N N S Q E - - - - - - - - - - - - N Y T T N S I E C E L M M D G G D D L E L F
gm017529_Glyma0    D D N G N L - Y L S F G E G H F Q G T K E T S P K S L T I P T K K F M R A P T N D T N N I - - - - - - - - - N D A E W F
 
AT4G00870.1     Y A A S F Y - - - - - - - - - - - G E D R S P R K E V S D E S L V W L T G P D E L R F S N Y E R A K E A G F H G V H T L
gm017529_Glyma0    Y V V S L T R T F A V N N N A S S S S S S L P G K S F A L G S V L W L N N M H E L Q F Y N C E R S N E A Q V H G I E T L
 
AT4G00870.1     V S I P I N N G I I E L G S S E S I I Q N R N F I N R V K S I F G S G K T T K H T N Q T G S Y P K P A V S D - - - - - -
gm017529_Glyma0    I C I P T Q N G V V E M G S Y D T I K Q N W N L V Q H V K S L F I T P P D P R R I N Q T Q T Q K P P R K N D N Y V N S E
 
AT4G00870.1     H S K S G N Q Q F G S E R K R R R K L E T T R V A A A T K E K H H P A V L - - - - - - S H V E A E K Q R R E K L N H R F
gm017529_Glyma0    H S D S D C P T L P T - - - - - - - - A T T P T T S E P K K R G R K P I L G R E T P V N H V E A E R Q R R E K L N H R F
 
AT4G00870.1     Y A L R A I V P K V S R M D K A S L L S D A V S Y I E S L K S K I D D L E T E - - - - - I K K M K M T E T D K L D N S S
gm017529_Glyma0    Y A L R A V V P N V S R M D K A S L L S D A V A Y I S E L K A K I E Y L E S Q Q P R D S S K K V K T E M T D T L D N H S
 
AT4G00870.1     S N T S P S S V E Y Q V N Q K P S K S N R G S D L E V Q V K I V G E E A I I R V Q T E N V N H P T S A L M S A L M E M D
gm017529_Glyma0    T - T T I S T V V D Q S G P E P R L G P S P L G L E V D V K I V G P D A M V R V Q S E N V N H P G A R L M G A L R D L E
 
AT4G00870.1     C R V Q H A N A S R L S Q V M V Q D V V V L V P E G L R S E D R L R T T L V R T L S L
gm017529_Glyma0    F Q V H H A S M S C V N D L M L Q D V V V K L P N G M R S E E G L K S A I L M R L D Q
 
0