fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G01280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp031792 not found in 410aa AT5G52660.1 1st_not 0.404761904 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G01280.1     MVSVNPRPKGFPVFDSSNMSLPSSDGFGSIPATGRTST---VSFSEDPTTKIRKPYTIKK
pp031792_Pp1s16 ------------------MNAASSEMLGVMVAGSTLSSIPPIPVSEEGSKKIRKPYTITK
                                  *. .**: :* : * .  *:   :..**: :.********.*

AT4G01280.1     SRENWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVVQIRSHAQKYFLKVQKSGANEHLP
pp031792_Pp1s16 SRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTGEHVP
                ***.**:**********:******************:***************.*:.**:*

AT4G01280.1     PPRPKRKASHPYPIKAPKNVAYTSLPSSSTLPLLEPGYLYSSDSKSLMGNQAVCASTS--
pp031792_Pp1s16 PPRPKRKSVQPYPQKAPKT-AQVQVSDGLRTQAVQTESSYGTGS-----HKPPMTSTSPS
                *******: :*** ****. * ..:...     ::.   *.:.*     ::.  :***  

AT4G01280.1     -SSWNHESTNLPKPVIE-EEPGVSATAPLPNNRCRQEDTERVRAVTKPNNEESCEKP---
pp031792_Pp1s16 ISAWVQHSVS-PNPSISYDAPGIKSEGEGVN----------LSAVRVPSNSISGSSPGGW
                 *:* :.*.. *:* *. : **:.: .   *          : **  *.*. * ..*   

AT4G01280.1     --H-------------RVMPNFAEVYSFIGSVFDPNTSGHLQRLKQMDPINMETVLLLMQ
pp031792_Pp1s16 PQHVLPASQVAPESCIRAAPDFAEVYKFIGSVFDPGVSGHLRKLKEMSAIDRETVLLLMH
                  *             *. *:*****.********..****::**:*..*: *******:

AT4G01280.1     NLSVNLTSPEFAEQR---------------------------------------------
pp031792_Pp1s16 NLSINLASPDFEEHDAGEDSPSVSGQAGTLAPSTPILVSPRSGNSAPTQHRASLLQAYAD
                ***:**:**:* *:                                              

AT4G01280.1     ----------------RLISS---------------------------------------
pp031792_Pp1s16 STADAGTARRHSHDGGRVISASFTSCGVSPAPEVLEPVSLGLPCTALQPQSPVLTTKPES
                                *:**:                                       

AT4G01280.1     -YSAKALK-----------------
pp031792_Pp1s16 VYSITSLPSLPAGLAGDESVDTWWT
                 ** .:*
BoxShade v3.31 C (beta, 970507) Output
AT4G01280.1     M V S V N P R P K G F P V F D S S N M S L P S S D G F G S I P A T G R T S T - - - V S F S E D P T T K I R K P Y T I K K
pp031792_Pp1s16    - - - - - - - - - - - - - - - - - - M N A A S S E M L G V M V A G S T L S S I P P I P V S E E G S K K I R K P Y T I T K
 
AT4G01280.1     S R E N W T D Q E H D K F L E A L H L F D R D W K K I E A F V G S K T V V Q I R S H A Q K Y F L K V Q K S G A N E H L P
pp031792_Pp1s16    S R E S W T E Q E H D K F L E A L Q L F D R D W K K I E A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H V P
 
AT4G01280.1     P P R P K R K A S H P Y P I K A P K N V A Y T S L P S S S T L P L L E P G Y L Y S S D S K S L M G N Q A V C A S T S - -
pp031792_Pp1s16    P P R P K R K S V Q P Y P Q K A P K T - A Q V Q V S D G L R T Q A V Q T E S S Y G T G S - - - - - H K P P M T S T S P S
 
AT4G01280.1     - S S W N H E S T N L P K P V I E - E E P G V S A T A P L P N N R C R Q E D T E R V R A V T K P N N E E S C E K P - - -
pp031792_Pp1s16    I S A W V Q H S V S - P N P S I S Y D A P G I K S E G E G V N - - - - - - - - - - L S A V R V P S N S I S G S S P G G W
 
AT4G01280.1     - - H - - - - - - - - - - - - - R V M P N F A E V Y S F I G S V F D P N T S G H L Q R L K Q M D P I N M E T V L L L M Q
pp031792_Pp1s16    P Q H V L P A S Q V A P E S C I R A A P D F A E V Y K F I G S V F D P G V S G H L R K L K E M S A I D R E T V L L L M H
 
AT4G01280.1     N L S V N L T S P E F A E Q R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp031792_Pp1s16    N L S I N L A S P D F E E H D A G E D S P S V S G Q A G T L A P S T P I L V S P R S G N S A P T Q H R A S L L Q A Y A D
 
AT4G01280.1     - - - - - - - - - - - - - - - - R L I S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp031792_Pp1s16    S T A D A G T A R R H S H D G G R V I S A S F T S C G V S P A P E V L E P V S L G L P C T A L Q P Q S P V L T T K P E S
 
AT4G01280.1     - Y S A K A L K - - - - - - - - - - - - - - - - -
pp031792_Pp1s16    V Y S I T S L P S L P A G L A G D E S V D T W W T
 
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