fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G01280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp023173 not found in 393aa AT5G52660.1 not_not 0.403061224 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G01280.1     MVSVNPRPKGFPVFDSSNMSLPSSDGFGSIPATGRTSTVSFSEDPTTKIRKPYTIKKSRE
pp023173_Pp1s46 MNAASVEMLGVMVAGSTVPGIPS---------------VSVSEEGSKKIRKPYTITKSRE
                * :.. .  *. * .*:  .:**               **.**: :.********.****

AT4G01280.1     NWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVVQIRSHAQKYFLKVQKSGANEHLPPPR
pp023173_Pp1s46 SWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTGEHVPPPR
                .**:**********:******************:***************.*:.**:****

AT4G01280.1     PKRKASHPYPIKAPK--------NVAYTSLPSSSTLPLLEPGYLYSSDSKSLMGNQAVCA
pp023173_Pp1s46 PKRKSAQPYPQKAPKCGIKSEVEGVSLTAVRASS---------------------NSISG
                ****:::*** ****        .*: *:: :**                     :::..

AT4G01280.1     STSSSWNHESTNLPKPVIEEEPGVSATAPLPNNRCRQEDTERVRAVTKPNNEESCEKPHR
pp023173_Pp1s46 SSPGGW-------PQHVLP----ASQIAP-----------------------ESCI---R
                *:...*       *: *:     .*  **                       ***    *

AT4G01280.1     VMPNFAEVYSFIGSVFDPNTSGHLQRLKQMDPINMETVLLLMQNLSVNLTSPEFAEQRRL
pp023173_Pp1s46 AAPDFTEVYKFIGSVFDPGVSGHLRKLKEMSPIDRETVLLLMRNLSINLASPDFEEHKLY
                . *:*:***.********..****::**:*.**: *******:***:**:**:* *::  

AT4G01280.1     ISSYSAKALK--------------------------------------------------
pp023173_Pp1s46 LSVYVNKEIKGKSTGTQDLTSAPSAAAQSSSDTGEDTSSVSGQAGTPQSNALLVSPRSGD
                :* *  * :*                                                  

AT4G01280.1     ------------------------------------------------------------
pp023173_Pp1s46 ADHTQQRASLLLAYSDNTADAGTPRRHSYDGGGAISASYTSSGVSPSPGDLEPVSLGPPS
                                                                            

AT4G01280.1     ----------------------------------------------
pp023173_Pp1s46 AALQPQIPVLTMKPERVYSAPSLPSLTSLPSLPAGLVDGSVDTWWT
BoxShade v3.31 C (beta, 970507) Output
AT4G01280.1     M V S V N P R P K G F P V F D S S N M S L P S S D G F G S I P A T G R T S T V S F S E D P T T K I R K P Y T I K K S R E
pp023173_Pp1s46    M N A A S V E M L G V M V A G S T V P G I P S - - - - - - - - - - - - - - - V S V S E E G S K K I R K P Y T I T K S R E
 
AT4G01280.1     N W T D Q E H D K F L E A L H L F D R D W K K I E A F V G S K T V V Q I R S H A Q K Y F L K V Q K S G A N E H L P P P R
pp023173_Pp1s46    S W T E Q E H D K F L E A L Q L F D R D W K K I E A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H V P P P R
 
AT4G01280.1     P K R K A S H P Y P I K A P K - - - - - - - - N V A Y T S L P S S S T L P L L E P G Y L Y S S D S K S L M G N Q A V C A
pp023173_Pp1s46    P K R K S A Q P Y P Q K A P K C G I K S E V E G V S L T A V R A S S - - - - - - - - - - - - - - - - - - - - - N S I S G
 
AT4G01280.1     S T S S S W N H E S T N L P K P V I E E E P G V S A T A P L P N N R C R Q E D T E R V R A V T K P N N E E S C E K P H R
pp023173_Pp1s46    S S P G G W - - - - - - - P Q H V L P - - - - A S Q I A P - - - - - - - - - - - - - - - - - - - - - - - E S C I - - - R
 
AT4G01280.1     V M P N F A E V Y S F I G S V F D P N T S G H L Q R L K Q M D P I N M E T V L L L M Q N L S V N L T S P E F A E Q R R L
pp023173_Pp1s46    A A P D F T E V Y K F I G S V F D P G V S G H L R K L K E M S P I D R E T V L L L M R N L S I N L A S P D F E E H K L Y
 
AT4G01280.1     I S S Y S A K A L K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp023173_Pp1s46    L S V Y V N K E I K G K S T G T Q D L T S A P S A A A Q S S S D T G E D T S S V S G Q A G T P Q S N A L L V S P R S G D
 
AT4G01280.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp023173_Pp1s46    A D H T Q Q R A S L L L A Y S D N T A D A G T P R R H S Y D G G G A I S A S Y T S S G V S P S P G D L E P V S L G P P S
 
AT4G01280.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp023173_Pp1s46    A A L Q P Q I P V L T M K P E R V Y S A P S L P S L T S L P S L P A G L V D G S V D T W W T
 
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