fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G01280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016621 not found in 356aa AT5G52660.2 1st_not 0.542517006 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G01280.1     MVSVNPRPK-GFPVFD----SSNMSLPSSDGFGSIPAT---------------GRTST--
pt016621_POPTR_ MVSVNPNPALGFYFFDPMNNSSHMELP---GVNFLPPTNTNTATDTCNDTVSAANTTTTT
                ******.*  ** .**    **:*.**   *.. :*.*               ..*:*  

AT4G01280.1     -------VSFSEDPTTKIRKPYTIKKSRENWTDQEHDKFLEALHLFDRDWKKIEAFVGSK
pt016621_POPTR_ NNNNHKLVSFSEDPNKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSK
                       *******..********.****.**:**********:****************

AT4G01280.1     TVVQIRSHAQKYFLKVQKSGANEHLPPPRPKRKASHPYPIKAPKNVAYT-----SLPSSS
pt016621_POPTR_ TVIQIRSHAQKYFLKVQKSGTSEHVPPPRPKRKAAHPYPQKAPKSAAVASQVTGSFQSSS
                **:*****************:.**:*********:**** ****..* :     *: ***

AT4G01280.1     TLPLLEPGYLYSSDSKSLMGNQAVCASTSSSWNHESTNLPKPV-----IEEEPGVSATAP
pt016621_POPTR_ A--LLEPGYLYRPDSTSVLGN-PITSGALSTWSFNSV---PPVSMSQMTNDDAGLA--GP
                :  ******** .**.*::** .: :.: *:*..:*.    **      :::.*::  .*

AT4G01280.1     LPNNRC----RQEDTERVRAVTKPNNEESCEKPHRVMPNFAEVYSFIGSVFDPNTSGHLQ
pt016621_POPTR_ TIANKCCYSSSNESASRTWQTGKIIDKRAQGKPERVMPDFAQVYSFIGNVFDPNGSDHLQ
                   *:*     :*.:.*.  . *  ::.:  **.****:**:******.***** *.***

AT4G01280.1     RLKQMDPINMETVLLLMQNLSVNLTSPEFAEQRRLISSYSAKALK---------------
pt016621_POPTR_ RLKQMDPINLETVLLLMRNLSINLTSPEFEDHRRLLASYDVDSEKVNEGGAYRNTTVDRL
                *********:*******:***:******* ::***::**...: *               

AT4G01280.1     -------
pt016621_POPTR_ GNPIPAI
BoxShade v3.31 C (beta, 970507) Output
AT4G01280.1     M V S V N P R P K - G F P V F D - - - - S S N M S L P S S D G F G S I P A T - - - - - - - - - - - - - - - G R T S T - -
pt016621_POPTR_    M V S V N P N P A L G F Y F F D P M N N S S H M E L P - - - G V N F L P P T N T N T A T D T C N D T V S A A N T T T T T
 
AT4G01280.1     - - - - - - - V S F S E D P T T K I R K P Y T I K K S R E N W T D Q E H D K F L E A L H L F D R D W K K I E A F V G S K
pt016621_POPTR_    N N N N H K L V S F S E D P N K K I R K P Y T I T K S R E S W T E Q E H D K F L E A L Q L F D R D W K K I E A F V G S K
 
AT4G01280.1     T V V Q I R S H A Q K Y F L K V Q K S G A N E H L P P P R P K R K A S H P Y P I K A P K N V A Y T - - - - - S L P S S S
pt016621_POPTR_    T V I Q I R S H A Q K Y F L K V Q K S G T S E H V P P P R P K R K A A H P Y P Q K A P K S A A V A S Q V T G S F Q S S S
 
AT4G01280.1     T L P L L E P G Y L Y S S D S K S L M G N Q A V C A S T S S S W N H E S T N L P K P V - - - - - I E E E P G V S A T A P
pt016621_POPTR_    A - - L L E P G Y L Y R P D S T S V L G N - P I T S G A L S T W S F N S V - - - P P V S M S Q M T N D D A G L A - - G P
 
AT4G01280.1     L P N N R C - - - - R Q E D T E R V R A V T K P N N E E S C E K P H R V M P N F A E V Y S F I G S V F D P N T S G H L Q
pt016621_POPTR_    T I A N K C C Y S S S N E S A S R T W Q T G K I I D K R A Q G K P E R V M P D F A Q V Y S F I G N V F D P N G S D H L Q
 
AT4G01280.1     R L K Q M D P I N M E T V L L L M Q N L S V N L T S P E F A E Q R R L I S S Y S A K A L K - - - - - - - - - - - - - - -
pt016621_POPTR_    R L K Q M D P I N L E T V L L L M R N L S I N L T S P E F E D H R R L L A S Y D V D S E K V N E G G A Y R N T T V D R L
 
AT4G01280.1     - - - - - - -
pt016621_POPTR_    G N P I P A I
 
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