fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G01280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt039031 not found in 362aa AT5G52660.1 not_not 0.532312925 III
Pt004415 not found in 313aa AT5G52660.1 not_not 0.501700680 III
Pt020472 LLLMRNLSLNLTSPSF in 277/317 AT5G52660.1 not_not 0.498299319 III
Pt004416 not found in 310aa AT5G52660.1 not_not 0.481292517 III
Pt007500 not found in 329aa AT3G09600.1 not_not 0.437074829 III
Pt007501 not found in 302aa AT3G09600.2 not_not 0.423469387 III
Pt043677 not found in 330aa AT3G09600.1 not_not 0.401360544 III
Pt043676 not found in 331aa AT3G09600.1 not_not 0.401360544 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G01280.1     -MVSVN-----------------PRP-KGFPVFD---SSNMSLPSSDGFGS---IPATGR
pt043677_POPTR_ MIMNTNSSS--STSTAGAGTE--ANP------GGP--DQAMAT-----QPPLAAAAATGT
pt043676_POPTR_ MIMNTNSSS--STSTAGAGTE--ANP------GGP--DQAMAT-----QPPLAAAAATGT
pt007501_POPTR_ MIMNANSSSSTSTSTAGAGAETGANP------AGP--SQSMATPTSSSTPP-ATGTGTGT
pt004415_POPTR_ -MVSKN-----------------PNPADGFY-LDP--NGMAALPGLSKFPT-T----TTT
pt007500_POPTR_ MIMNANSSSSTSTSTAGAGAETGANP------AGP--SQSMATPTSSSTPP-ATGTGTGT
pt039031_POPTR_ -MVSVN-----------------PNPAQGFYFFDPMNNSNMGLPGLDSLP----PPPTTT
pt004416_POPTR_ -MVSKN-----------------PNPADGFY-LDP--NGMAALPGLSKFPT-T----TTT
pt020472_POPTR_ -MVSKN-----------------PNPADGSY-LDP--TGMAALPGLSPFPT-TTTPPTTT
                 ::. *                 ..*       .       .               *  

AT4G01280.1     TSTVSF------------------------------SEDPTTKIRKPYTIKKSRENWTDQ
pt043677_POPTR_ TSATS-------------------------------SDGSGKKVRKPYTITKSRESWTEE
pt043676_POPTR_ TSATS-------------------------------SDGSGKKVRKPYTITKSRESWTEE
pt007501_POPTR_ TAAAS-------------------------------SDGSGKKVRKPYTITKSRESWTEE
pt004415_POPTR_ TASDSS------------------------------SEDPSKKIRKPYTITKSRESWTEP
pt007500_POPTR_ TAAAS-------------------------------SDGSGKKVRKPYTITKSRESWTEE
pt039031_POPTR_ AATPSNTATATATNTCKNTVSTVNTNNNHNNTVMSFSEDSSKKIRKPYTITKSRESWTEQ
pt004416_POPTR_ TASDSS------------------------------SEDPSKKIRKPYTITKSRESWTEP
pt020472_POPTR_ TTSSST------------------------------SEDPNKKIRKPYTITKSRESWSEP
                ::: *                               *:.. .*:******.****.*:: 

AT4G01280.1     EHDKFLEALHLFDRDWKKIEAFVGSKTVVQIRSHAQKYFLKVQKSGANEHLPPPRPKRKA
pt043677_POPTR_ EHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTIAHVPPPRPKRKA
pt043676_POPTR_ EHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTIAHVPPPRPKRKA
pt007501_POPTR_ EHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTSAHVPPPRPKRKA
pt004415_POPTR_ EHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKSGTSEHLPPPRPKRKA
pt007500_POPTR_ EHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTSAHVPPPRPKRKA
pt039031_POPTR_ EHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGTSEHVPPPRPKRKA
pt004416_POPTR_ EHDKFLEALQL---DWKKIEAFIGSKTVIQIRSHAQKYFLKVQKSGTSEHLPPPRPKRKA
pt020472_POPTR_ EHDKFLEALQLFDRDWKKIGAFIGSKTIIQIRSHAQKYFLKVQKSGTNEHLPPPRPKRKA
                *********:*   *****  *:****::***************.*:  *:*********

AT4G01280.1     SHPYPIKAPKNVAYTSLPSS---STLPLLEPGYLYSSDSKSLMGNQAVCASTSSSWNHES
pt043677_POPTR_ SHPYPQKASKIVLLPLPVSMAYPSSMNTFTPGYAPW-DETSMLITSATRKIMPSQ-----
pt043676_POPTR_ SHPYPQKASKIVLLPLPVSMAYPSSMNTFTPGYAPW-DETSMLITSATRKIMPSQ-----
pt007501_POPTR_ SHPYPQKASKNVLVPLPASMAYASSTNTFAPGYALW-DETSVLINSATSKIMPSQ-----
pt004415_POPTR_ AHPYPQKASKNAVVLSQPSGSSHSSSAPLESGCALRPDSSSIPMNPIVSAAAASSWT---
pt007500_POPTR_ SHPYPQKASKNVLVPLPASMAYASSTNTFAPGYALW-DETSVLINSATSKIMPSQ-----
pt039031_POPTR_ AHPYPQKASK-TVVASQATGLFQSSSTLLEPGYLYRPDTTSDLGNPITSGS-SSTWSY--
pt004416_POPTR_ AHPYPQKASKNAVVLSQPSGSSHSSSAPLESGCALRPDSSSIPMNPIVSAAAASSWT---
pt020472_POPTR_ AHPYPQKASKNAIVLSQPSEAFQSSSAPLEPGYVLRPDSSSIPMNPIASAAVASSWT---
                :**** **.* .      :    *:   : .*     * .*   .  .    .*      

AT4G01280.1     TNLPKPVIEEE---PGV-SAT--APLP----NNRCR----QEDTERVRAVTKPNNEESCE
pt043677_POPTR_ DELANFHGAEADIGTK--DVSDIGTKGVSRFSYNTV--SGLGTSSRTLPSAEMPKQGKQA
pt043676_POPTR_ DELANFHGAEG-VHTSLFDVSDIGTKGVSRFSYNTV--SGLGTSSRTLPSAEMPKQGKQA
pt007501_POPTR_ DELPNLHGAEA----------DIGPKCVSS-SNNTV--SGLGTSSRTLPSAEMPKQGKQA
pt004415_POPTR_ NNVPTVSVSNQ---TT-------GALV----ANNCC--SSSESTPRTKPVGKTAEKGNHG
pt007500_POPTR_ DELPNLHGAEA----------DIGPKCVSS-SNNTV--SGLGTSSRTLPSAEMPKQGKQA
pt039031_POPTR_ NSGPPVNMSQM---TTD-DAGLAGPTI----SYKCCYSSSNESTPRTWQAGKIIDNKDQG
pt004416_POPTR_ NNVPTVSVSNQ---TT-------GALV----ANNCC--SSSESTPRTKPVGKTAEKGNHG
pt020472_POPTR_ NNVPTVSLSNQ---TK-------GPVA----ANNCC--SSTESTPRTKPIGKTAEQGNHG
                 . .     :             ..        .         : *.    :  .: .  

AT4G01280.1     KPHRVMPNFAEVYSFIGSVFDPNTSGHLQRLKQMDPINMETVLLLMQNLSVNLTSPEFAE
pt043677_POPTR_ PVLHGIPDFAEVYSFIGSVFDVETKGHVKKLNEMDPINFETVLLLMRNLTVNLSSPDFEP
pt043676_POPTR_ PVLHGIPDFAEVYSFIGSVFDVETKGHVKKLNEMDPINFETVLLLMRNLTVNLSSPDFEP
pt007501_POPTR_ PVLHGIPDFAEVYSFIGSVFDPDTKGHVEKLQEMDPINFETVLLLMRNLTVNLSSPDFEP
pt004415_POPTR_ QSMRVLPDFAQVYGFIGSVFDPNVTGHLHNLKKMDPIDVETVLLLMRNLAINLTSPSFEE
pt007500_POPTR_ PVLHGIPDFAEVYSFIGSVFDPDTKGHVEKLQEMDPINFETVLLLMRNLTVNLSSPDFEP
pt039031_POPTR_ KPERVMPDFAQVYSFIGSVFDPNARDHLQRLKQMDPINLETVVLLMRNLSVNLTSPEFED
pt004416_POPTR_ QSMRVLPDFAQVYGFIGSVFDPNVTGHLHNLKKMDPIDVETVLLLMRNLAINLTSPSFEE
pt020472_POPTR_ HSMRVLPDFSQVYGFIGSVFDPNVTDQLQNLKKMDPIDVETVLLLMRNLSLNLTSPSFEE
                   : :*:*::**.******* :. .::..*::****:.***:***:**::**:**.*  

AT4G01280.1     QRRLISSYSAKALK-----------------------
pt043677_POPTR_ IRKVMSSYDVNSKTVGVAA---------LNQTNDIAC
pt043676_POPTR_ IRKVMSSYDVNSKTVGVAA---------LNQTNDIAC
pt007501_POPTR_ Y------------------------------------
pt004415_POPTR_ HRKLLSSNEMDSEAMGVN--------KNVDQPMDVA-
pt007500_POPTR_ YRKVMSSYDVNTKTVGVSA---------LKQTNDIAC
pt039031_POPTR_ HRRLLASYDVDSEKENAGGSYSNCSVDNLGNPIPAM-
pt004416_POPTR_ HRKLLSSNEMDSEAMGVN--------KNVDQPMDVA-
pt020472_POPTR_ HRTLLSSHEIDSETIGAN--------NNADQSMNVA-
BoxShade v3.31 C (beta, 970507) Output
AT4G01280.1     - M V S V N - - - - - - - - - - - - - - - - - P R P - K G F P V F D - - - S S N M S L P S S D G F G S - - - I P A T G R
pt043677_POPTR_    M I M N T N S S S - - S T S T A G A G T E - - A N P - - - - - - G G P - - D Q A M A T - - - - - Q P P L A A A A A T G T
pt043676_POPTR_    M I M N T N S S S - - S T S T A G A G T E - - A N P - - - - - - G G P - - D Q A M A T - - - - - Q P P L A A A A A T G T
pt007501_POPTR_    M I M N A N S S S S T S T S T A G A G A E T G A N P - - - - - - A G P - - S Q S M A T P T S S S T P P - A T G T G T G T
pt004415_POPTR_    - M V S K N - - - - - - - - - - - - - - - - - P N P A D G F Y - L D P - - N G M A A L P G L S K F P T - T - - - - T T T
pt007500_POPTR_    M I M N A N S S S S T S T S T A G A G A E T G A N P - - - - - - A G P - - S Q S M A T P T S S S T P P - A T G T G T G T
pt039031_POPTR_    - M V S V N - - - - - - - - - - - - - - - - - P N P A Q G F Y F F D P M N N S N M G L P G L D S L P - - - - P P P T T T
pt004416_POPTR_    - M V S K N - - - - - - - - - - - - - - - - - P N P A D G F Y - L D P - - N G M A A L P G L S K F P T - T - - - - T T T
pt020472_POPTR_    - M V S K N - - - - - - - - - - - - - - - - - P N P A D G S Y - L D P - - T G M A A L P G L S P F P T - T T T P P T T T
 
AT4G01280.1     T S T V S F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S E D P T T K I R K P Y T I K K S R E N W T D Q
pt043677_POPTR_    T S A T S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S D G S G K K V R K P Y T I T K S R E S W T E E
pt043676_POPTR_    T S A T S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S D G S G K K V R K P Y T I T K S R E S W T E E
pt007501_POPTR_    T A A A S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S D G S G K K V R K P Y T I T K S R E S W T E E
pt004415_POPTR_    T A S D S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S E D P S K K I R K P Y T I T K S R E S W T E P
pt007500_POPTR_    T A A A S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S D G S G K K V R K P Y T I T K S R E S W T E E
pt039031_POPTR_    A A T P S N T A T A T A T N T C K N T V S T V N T N N N H N N T V M S F S E D S S K K I R K P Y T I T K S R E S W T E Q
pt004416_POPTR_    T A S D S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S E D P S K K I R K P Y T I T K S R E S W T E P
pt020472_POPTR_    T T S S S T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S E D P N K K I R K P Y T I T K S R E S W S E P
 
AT4G01280.1     E H D K F L E A L H L F D R D W K K I E A F V G S K T V V Q I R S H A Q K Y F L K V Q K S G A N E H L P P P R P K R K A
pt043677_POPTR_    E H D K F L E A L Q L F D R D W K K I E D F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T I A H V P P P R P K R K A
pt043676_POPTR_    E H D K F L E A L Q L F D R D W K K I E D F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T I A H V P P P R P K R K A
pt007501_POPTR_    E H D K F L E A L Q L F D R D W K K I E D F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T S A H V P P P R P K R K A
pt004415_POPTR_    E H D K F L E A L Q L F D R D W K K I E A F I G S K T V I Q I R S H A Q K Y F L K V Q K S G T S E H L P P P R P K R K A
pt007500_POPTR_    E H D K F L E A L Q L F D R D W K K I E D F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T S A H V P P P R P K R K A
pt039031_POPTR_    E H D K F L E A L Q L F D R D W K K I E A F V G S K T V I Q I R S H A Q K Y F L K V Q K S G T S E H V P P P R P K R K A
pt004416_POPTR_    E H D K F L E A L Q L - - - D W K K I E A F I G S K T V I Q I R S H A Q K Y F L K V Q K S G T S E H L P P P R P K R K A
pt020472_POPTR_    E H D K F L E A L Q L F D R D W K K I G A F I G S K T I I Q I R S H A Q K Y F L K V Q K S G T N E H L P P P R P K R K A
 
AT4G01280.1     S H P Y P I K A P K N V A Y T S L P S S - - - S T L P L L E P G Y L Y S S D S K S L M G N Q A V C A S T S S S W N H E S
pt043677_POPTR_    S H P Y P Q K A S K I V L L P L P V S M A Y P S S M N T F T P G Y A P W - D E T S M L I T S A T R K I M P S Q - - - - -
pt043676_POPTR_    S H P Y P Q K A S K I V L L P L P V S M A Y P S S M N T F T P G Y A P W - D E T S M L I T S A T R K I M P S Q - - - - -
pt007501_POPTR_    S H P Y P Q K A S K N V L V P L P A S M A Y A S S T N T F A P G Y A L W - D E T S V L I N S A T S K I M P S Q - - - - -
pt004415_POPTR_    A H P Y P Q K A S K N A V V L S Q P S G S S H S S S A P L E S G C A L R P D S S S I P M N P I V S A A A A S S W T - - -
pt007500_POPTR_    S H P Y P Q K A S K N V L V P L P A S M A Y A S S T N T F A P G Y A L W - D E T S V L I N S A T S K I M P S Q - - - - -
pt039031_POPTR_    A H P Y P Q K A S K - T V V A S Q A T G L F Q S S S T L L E P G Y L Y R P D T T S D L G N P I T S G S - S S T W S Y - -
pt004416_POPTR_    A H P Y P Q K A S K N A V V L S Q P S G S S H S S S A P L E S G C A L R P D S S S I P M N P I V S A A A A S S W T - - -
pt020472_POPTR_    A H P Y P Q K A S K N A I V L S Q P S E A F Q S S S A P L E P G Y V L R P D S S S I P M N P I A S A A V A S S W T - - -
 
AT4G01280.1     T N L P K P V I E E E - - - P G V - S A T - - A P L P - - - - N N R C R - - - - Q E D T E R V R A V T K P N N E E S C E
pt043677_POPTR_    D E L A N F H G A E A D I G T K - - D V S D I G T K G V S R F S Y N T V - - S G L G T S S R T L P S A E M P K Q G K Q A
pt043676_POPTR_    D E L A N F H G A E G - V H T S L F D V S D I G T K G V S R F S Y N T V - - S G L G T S S R T L P S A E M P K Q G K Q A
pt007501_POPTR_    D E L P N L H G A E A - - - - - - - - - - D I G P K C V S S - S N N T V - - S G L G T S S R T L P S A E M P K Q G K Q A
pt004415_POPTR_    N N V P T V S V S N Q - - - T T - - - - - - - G A L V - - - - A N N C C - - S S S E S T P R T K P V G K T A E K G N H G
pt007500_POPTR_    D E L P N L H G A E A - - - - - - - - - - D I G P K C V S S - S N N T V - - S G L G T S S R T L P S A E M P K Q G K Q A
pt039031_POPTR_    N S G P P V N M S Q M - - - T T D - D A G L A G P T I - - - - S Y K C C Y S S S N E S T P R T W Q A G K I I D N K D Q G
pt004416_POPTR_    N N V P T V S V S N Q - - - T T - - - - - - - G A L V - - - - A N N C C - - S S S E S T P R T K P V G K T A E K G N H G
pt020472_POPTR_    N N V P T V S L S N Q - - - T K - - - - - - - G P V A - - - - A N N C C - - S S T E S T P R T K P I G K T A E Q G N H G
 
AT4G01280.1     K P H R V M P N F A E V Y S F I G S V F D P N T S G H L Q R L K Q M D P I N M E T V L L L M Q N L S V N L T S P E F A E
pt043677_POPTR_    P V L H G I P D F A E V Y S F I G S V F D V E T K G H V K K L N E M D P I N F E T V L L L M R N L T V N L S S P D F E P
pt043676_POPTR_    P V L H G I P D F A E V Y S F I G S V F D V E T K G H V K K L N E M D P I N F E T V L L L M R N L T V N L S S P D F E P
pt007501_POPTR_    P V L H G I P D F A E V Y S F I G S V F D P D T K G H V E K L Q E M D P I N F E T V L L L M R N L T V N L S S P D F E P
pt004415_POPTR_    Q S M R V L P D F A Q V Y G F I G S V F D P N V T G H L H N L K K M D P I D V E T V L L L M R N L A I N L T S P S F E E
pt007500_POPTR_    P V L H G I P D F A E V Y S F I G S V F D P D T K G H V E K L Q E M D P I N F E T V L L L M R N L T V N L S S P D F E P
pt039031_POPTR_    K P E R V M P D F A Q V Y S F I G S V F D P N A R D H L Q R L K Q M D P I N L E T V V L L M R N L S V N L T S P E F E D
pt004416_POPTR_    Q S M R V L P D F A Q V Y G F I G S V F D P N V T G H L H N L K K M D P I D V E T V L L L M R N L A I N L T S P S F E E
pt020472_POPTR_    H S M R V L P D F S Q V Y G F I G S V F D P N V T D Q L Q N L K K M D P I D V E T V L L L M R N L S L N L T S P S F E E
 
AT4G01280.1     Q R R L I S S Y S A K A L K - - - - - - - - - - - - - - - - - - - - - - -
pt043677_POPTR_    I R K V M S S Y D V N S K T V G V A A - - - - - - - - - L N Q T N D I A C
pt043676_POPTR_    I R K V M S S Y D V N S K T V G V A A - - - - - - - - - L N Q T N D I A C
pt007501_POPTR_    Y - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt004415_POPTR_    H R K L L S S N E M D S E A M G V N - - - - - - - - K N V D Q P M D V A -
pt007500_POPTR_    Y R K V M S S Y D V N T K T V G V S A - - - - - - - - - L K Q T N D I A C
pt039031_POPTR_    H R R L L A S Y D V D S E K E N A G G S Y S N C S V D N L G N P I P A M -
pt004416_POPTR_    H R K L L S S N E M D S E A M G V N - - - - - - - - K N V D Q P M D V A -
pt020472_POPTR_    H R T L L S S H E I D S E T I G A N - - - - - - - - N N A D Q S M N V A -
 
0