fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G01280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os023204 not found in 298aa AT5G52660.2 not_not 0.414965986 III
Os023203 not found in 298aa AT5G52660.2 not_not 0.414965986 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G01280.1     MVSVNPRPKGFPVFDSSNMSLPSSDGFGSIPATGRTSTVSFSEDPTTKIRKPYTIKKSRE
Os023204_Os06t0 -MSSAPQ----QLLDS------SSPGPGPGPEV--------EDDGGRRVRKPYTITKSRE
Os023203_Os06t0 -MSSAPQ----QLLDS------SSPGPGPGPEV--------EDDGGRRVRKPYTITKSRE
                 :*  *:     ::**      ** * *. * .        .:*   ::******.****

AT4G01280.1     NWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVVQIRSHAQKYFLKVQKSGANEHLPPPR
Os023204_Os06t0 SWTDPEHDKFLEALQLFDRDWKKIEAYVGSKTVIQIRSHAQKYFLKVQKNGTGEHLPPPR
Os023203_Os06t0 SWTDPEHDKFLEALQLFDRDWKKIEAYVGSKTVIQIRSHAQKYFLKVQKNGTGEHLPPPR
                .*** *********:***********:******:***************.*:.*******

AT4G01280.1     PKRKASHPYPIKAPKNVAYTSLPSSSTLPLLEPGYLYSSDSKSLMGN-----------QA
Os023204_Os06t0 PKRKAAHPYPHKASKRAPQVVLPQQAS-HLMEQGCLIPMDISPVARNFNANDVFSSWDSA
Os023203_Os06t0 PKRKAAHPYPHKASKRAPQVVLPQQAS-HLMEQGCLIPMDISPVARNFNANDVFSSWDSA
                *****:**** **.*... . **..::  *:* * * . * ..:  *           .*

AT4G01280.1     VCASTSSSWNHESTNLPKPVIEEEPGVSATAPLPNNRCRQEDTERVRAVTKPNNEESCEK
Os023204_Os06t0 LAQSFSPRHTHGAANNCSSSVESQSGTCPTS---------------EAI-----EQEIML
Os023203_Os06t0 LAQSFSPRHTHGAANNCSSSVESQSGTCPTS---------------EAI-----EQEIML
                :. * *.  .* ::*  .. :*.:.*...*:               .*:     *:.   

AT4G01280.1     PH-RVMPNFAEVYSFIGSVFDPNTSGHLQRLKQMDPINMETVLLLMQNLSVNLTSPEFAE
Os023204_Os06t0 PTLRAMPDFAQVYNFLGSIFDPETSGHLQRLREMDPIDVETVLLLMKNLSINLTNPNFEA
Os023203_Os06t0 PTLRAMPDFAQVYNFLGSIFDPETSGHLQRLREMDPIDVETVLLLMKNLSINLTNPNFEA
                *  *.**:**:**.*:**:***:********::****::*******:***:***.*:*  

AT4G01280.1     QRRLISS--YSAKALK----------------------
Os023204_Os06t0 HRKVLASHGYGMDQVKHENLGDLGSTHTLHLPFMVTTK
Os023203_Os06t0 HRKVLASHGYGMDQVKHENLGDLGSTHTLHLPFMVTTK
                :*::::*  *. . :*
BoxShade v3.31 C (beta, 970507) Output
AT4G01280.1     M V S V N P R P K G F P V F D S S N M S L P S S D G F G S I P A T G R T S T V S F S E D P T T K I R K P Y T I K K S R E
Os023204_Os06t0    - M S S A P Q - - - - Q L L D S - - - - - - S S P G P G P G P E V - - - - - - - - E D D G G R R V R K P Y T I T K S R E
Os023203_Os06t0    - M S S A P Q - - - - Q L L D S - - - - - - S S P G P G P G P E V - - - - - - - - E D D G G R R V R K P Y T I T K S R E
 
AT4G01280.1     N W T D Q E H D K F L E A L H L F D R D W K K I E A F V G S K T V V Q I R S H A Q K Y F L K V Q K S G A N E H L P P P R
Os023204_Os06t0    S W T D P E H D K F L E A L Q L F D R D W K K I E A Y V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H L P P P R
Os023203_Os06t0    S W T D P E H D K F L E A L Q L F D R D W K K I E A Y V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H L P P P R
 
AT4G01280.1     P K R K A S H P Y P I K A P K N V A Y T S L P S S S T L P L L E P G Y L Y S S D S K S L M G N - - - - - - - - - - - Q A
Os023204_Os06t0    P K R K A A H P Y P H K A S K R A P Q V V L P Q Q A S - H L M E Q G C L I P M D I S P V A R N F N A N D V F S S W D S A
Os023203_Os06t0    P K R K A A H P Y P H K A S K R A P Q V V L P Q Q A S - H L M E Q G C L I P M D I S P V A R N F N A N D V F S S W D S A
 
AT4G01280.1     V C A S T S S S W N H E S T N L P K P V I E E E P G V S A T A P L P N N R C R Q E D T E R V R A V T K P N N E E S C E K
Os023204_Os06t0    L A Q S F S P R H T H G A A N N C S S S V E S Q S G T C P T S - - - - - - - - - - - - - - - E A I - - - - - E Q E I M L
Os023203_Os06t0    L A Q S F S P R H T H G A A N N C S S S V E S Q S G T C P T S - - - - - - - - - - - - - - - E A I - - - - - E Q E I M L
 
AT4G01280.1     P H - R V M P N F A E V Y S F I G S V F D P N T S G H L Q R L K Q M D P I N M E T V L L L M Q N L S V N L T S P E F A E
Os023204_Os06t0    P T L R A M P D F A Q V Y N F L G S I F D P E T S G H L Q R L R E M D P I D V E T V L L L M K N L S I N L T N P N F E A
Os023203_Os06t0    P T L R A M P D F A Q V Y N F L G S I F D P E T S G H L Q R L R E M D P I D V E T V L L L M K N L S I N L T N P N F E A
 
AT4G01280.1     Q R R L I S S - - Y S A K A L K - - - - - - - - - - - - - - - - - - - - - -
Os023204_Os06t0    H R K V L A S H G Y G M D Q V K H E N L G D L G S T H T L H L P F M V T T K
Os023203_Os06t0    H R K V L A S H G Y G M D Q V K H E N L G D L G S T H T L H L P F M V T T K
 
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