fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G01280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027895 not found in 294aa AT5G52660.1 1st_not 0.488095238 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G01280.1     MVSVNPRPKGFPVFDSSNMSLP--SSDGFGSIPATGRTSTVSFSEDPTTKIRKPYTIKKS
Sb027895_Sorbi1 ----DPSPLTFLSMVSASAPPPPLQSDAAGS------------GEDASKKVRKPYTITKS
                    :* *  *  : *:. . *  .**. **            .**.:.*:******.**

AT4G01280.1     RENWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVVQIRSHAQKYFLKVQKSGANEHLPP
Sb027895_Sorbi1 RESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPP
                **.**:**********:******************:***************.*:.**:**

AT4G01280.1     PRPKRKASHPYPIKAPKNVAYTSLPSSSTLPLLEPGYLYSSDSKSLMGNQAVCASTSSSW
Sb027895_Sorbi1 PRPKRKAAHPYPQKASKN---------------EPNYGLKTDSSSIHRNSGMNVSV-SSW
                *******:**** **.**               **.*  .:**.*:  *..: .*. ***

AT4G01280.1     NHESTNLPKPV----IEEEPGVSATAPLPNNRCRQEDTERVRAVTKP--NNEESCEKPH-
Sb027895_Sorbi1 AHSS--IPQAVASTMVKEDLG--AGTPGPNNFC-SSSTEGPPRTWQPGETNDQINQVPSL
                 *.*  :*:.*    ::*: *  * :* *** * ...**    . :*  .*::  : *  

AT4G01280.1     RVMPNFAEVYSFIGSVFDPNTSGHLQRLKQMDPINMETVLLLMQNLSVNLTSPEFAEQRR
Sb027895_Sorbi1 RLMPDFAEVYSFLGSVFDPSTSGHLQKLKEMNPIDVETALLLMRNLSINLTSPDFEDQRK
                *:**:*******:******.******:**:*:**::**.****:***:*****:* :**:

AT4G01280.1     LISSYS-----------AKALK------
Sb027895_Sorbi1 LLSSYSTSDGLQLGSSRSSALAMSTPFM
                *:****           :.**
BoxShade v3.31 C (beta, 970507) Output
AT4G01280.1     M V S V N P R P K G F P V F D S S N M S L P - - S S D G F G S I P A T G R T S T V S F S E D P T T K I R K P Y T I K K S
Sb027895_Sorbi1    - - - - D P S P L T F L S M V S A S A P P P P L Q S D A A G S - - - - - - - - - - - - G E D A S K K V R K P Y T I T K S
 
AT4G01280.1     R E N W T D Q E H D K F L E A L H L F D R D W K K I E A F V G S K T V V Q I R S H A Q K Y F L K V Q K S G A N E H L P P
Sb027895_Sorbi1    R E S W T E Q E H D K F L E A L Q L F D R D W K K I E A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T S E H V P P
 
AT4G01280.1     P R P K R K A S H P Y P I K A P K N V A Y T S L P S S S T L P L L E P G Y L Y S S D S K S L M G N Q A V C A S T S S S W
Sb027895_Sorbi1    P R P K R K A A H P Y P Q K A S K N - - - - - - - - - - - - - - - E P N Y G L K T D S S S I H R N S G M N V S V - S S W
 
AT4G01280.1     N H E S T N L P K P V - - - - I E E E P G V S A T A P L P N N R C R Q E D T E R V R A V T K P - - N N E E S C E K P H -
Sb027895_Sorbi1    A H S S - - I P Q A V A S T M V K E D L G - - A G T P G P N N F C - S S S T E G P P R T W Q P G E T N D Q I N Q V P S L
 
AT4G01280.1     R V M P N F A E V Y S F I G S V F D P N T S G H L Q R L K Q M D P I N M E T V L L L M Q N L S V N L T S P E F A E Q R R
Sb027895_Sorbi1    R L M P D F A E V Y S F L G S V F D P S T S G H L Q K L K E M N P I D V E T A L L L M R N L S I N L T S P D F E D Q R K
 
AT4G01280.1     L I S S Y S - - - - - - - - - - - A K A L K - - - - - -
Sb027895_Sorbi1    L L S S Y S T S D G L Q L G S S R S S A L A M S T P F M
 
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