fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G01280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb033225 SNAPNHLRLGLLDMLV in 376/488 AT5G52660.2 not_not 0.413265306 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G01280.1     -----------------MVSVNPRPKGFPVFDSSNMSLPSSDGFG---------------
Sb033225_Sorbi1 GLRYATRKEEQEGSGRSMVSMSTTPH--PL----DPSVPAVAGGGKEEEEEAGRAREEAA
                                 ***:.. *:  *:    : *:*:  * *               

AT4G01280.1     ---SIPATGRTSTVSFSEDPT--TKIRKPYTIKKSRENWTDQEHDKFLEALHLFDRDWKK
Sb033225_Sorbi1 AAAAAPAAVPVPTVGNDDDDDGPRRVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKK
                   : **:  ..**. .:*     ::******.****.*** *********:********

AT4G01280.1     IEAFVGSKTVVQIRSHAQKYFLKVQKSGANEHLPPPRPKRKASHPYPIKAPKNVAYTSLP
Sb033225_Sorbi1 IEAYVGSKTVIQIRSHAQKYFLKVQKNGTGEHLPPPRPKRKAAHPYPHKASKKALQVVLP
                ***:******:***************.*:.************:**** **.*:.  . **

AT4G01280.1     SSSTLPLLEPGYLYSSDSKSLMGNQAVCASTSSSWNHESTNLPKPVIEEEPGVSATAPLP
Sb033225_Sorbi1 QQAS-HIMEQGCGTPMDT-------ATVATDSSA------NDAFPVQHFSPRHTQGATYN
                ..::  ::* *   . *:       *. *: **:      * . ** . .*  :  *.  

AT4G01280.1     NNRC--RQEDTERVRAVTKPNNEESCEKPH-RVMPNFAEVYSFIGSVFDPNTSGHLQRLK
Sb033225_Sorbi1 NSSSIGSQSGT----WPTSEGTEQDIRHPALSAMPDFARVYNFLGSIFDPETNGHLQQLK
                *. .   *..*      *. ..*:. .:*   .**:**.**.*:**:***:*.****:**

AT4G01280.1     QMDPINMETVLLLMQNLSVNLTSPEFAEQRRLISSYSAKALK----------------
Sb033225_Sorbi1 EMDPIDAETVLLLMKNLSINLTSPNFEEHRRLLSSHASSMDQEMGSSHIHLPFMITSK
                :****: *******:***:*****:* *:***:**:::.  :
BoxShade v3.31 C (beta, 970507) Output
AT4G01280.1     - - - - - - - - - - - - - - - - - M V S V N P R P K G F P V F D S S N M S L P S S D G F G - - - - - - - - - - - - - - -
Sb033225_Sorbi1    G L R Y A T R K E E Q E G S G R S M V S M S T T P H - - P L - - - - D P S V P A V A G G G K E E E E E A G R A R E E A A
 
AT4G01280.1     - - - S I P A T G R T S T V S F S E D P T - - T K I R K P Y T I K K S R E N W T D Q E H D K F L E A L H L F D R D W K K
Sb033225_Sorbi1    A A A A A P A A V P V P T V G N D D D D D G P R R V R K P Y T I T K S R E S W T D P E H D K F L E A L Q L F D R D W K K
 
AT4G01280.1     I E A F V G S K T V V Q I R S H A Q K Y F L K V Q K S G A N E H L P P P R P K R K A S H P Y P I K A P K N V A Y T S L P
Sb033225_Sorbi1    I E A Y V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H L P P P R P K R K A A H P Y P H K A S K K A L Q V V L P
 
AT4G01280.1     S S S T L P L L E P G Y L Y S S D S K S L M G N Q A V C A S T S S S W N H E S T N L P K P V I E E E P G V S A T A P L P
Sb033225_Sorbi1    Q Q A S - H I M E Q G C G T P M D T - - - - - - - A T V A T D S S A - - - - - - N D A F P V Q H F S P R H T Q G A T Y N
 
AT4G01280.1     N N R C - - R Q E D T E R V R A V T K P N N E E S C E K P H - R V M P N F A E V Y S F I G S V F D P N T S G H L Q R L K
Sb033225_Sorbi1    N S S S I G S Q S G T - - - - W P T S E G T E Q D I R H P A L S A M P D F A R V Y N F L G S I F D P E T N G H L Q Q L K
 
AT4G01280.1     Q M D P I N M E T V L L L M Q N L S V N L T S P E F A E Q R R L I S S Y S A K A L K - - - - - - - - - - - - - - - -
Sb033225_Sorbi1    E M D P I D A E T V L L L M K N L S I N L T S P N F E E H R R L L S S H A S S M D Q E M G S S H I H L P F M I T S K
 
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