fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G01280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027895 not found in 294aa AT5G52660.1 1st_not 0.488095238 II
Sb033225 SNAPNHLRLGLLDMLV in 376/488 AT5G52660.2 not_not 0.413265306 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G01280.1     -----------------MVSVNPRPKGFPVFDSSNMSLPSSDGFG---------------
Sb033225_Sorbi1 GLRYATRKEEQEGSGRSMVSMSTTP---HPLDPSV---PAVAGGGKEEEEEAGRAREEAA
Sb027895_Sorbi1 --------DPSPLTFLSMVSASAPP---PPLQSD------AAGSG---------------
                                 *** .. *     ::..        * *               

AT4G01280.1     ---SIPATGRTSTVSFS--EDPTTKIRKPYTIKKSRENWTDQEHDKFLEALHLFDRDWKK
Sb033225_Sorbi1 AAAAAPAAVPVPTVGNDDDDDGPRRVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKK
Sb027895_Sorbi1 -------------------EDASKKVRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKK
                                   :* . ::******.****.**: *********:********

AT4G01280.1     IEAFVGSKTVVQIRSHAQKYFLKVQKSGANEHLPPPRPKRKASHPYPIKAPKNVAYTSLP
Sb033225_Sorbi1 IEAYVGSKTVIQIRSHAQKYFLKVQKNGTGEHLPPPRPKRKAAHPYPHKASKK-------
Sb027895_Sorbi1 IEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKASKN-------
                ***:******:***************.*:.**:*********:**** **.*:       

AT4G01280.1     SSSTLPLLEPGYLYSSDSKSLMGN-----QAVCASTSSSWNHESTN--LPKPVIEEEPGV
Sb033225_Sorbi1 --------ALQVVLPQQASHIMEQGCGTPMDTATVATDSSANDAFP--VQHFSPRHTQG-
Sb027895_Sorbi1 --------EPNYGLKTDSSSIHRN------SGMNVSVSSWAHSSIPQAVASTMVKEDLG-
                                ::. :  :           : .*  :.:    :     ..  * 

AT4G01280.1     SATAPLPNNRCRQEDTERVRA-VTKPNNEESCEKPH-RVMPNFAEVYSFIGSVFDPNTSG
Sb033225_Sorbi1 -ATY---NN--SSSIGSQSGTWPTSEGTEQDIRHPALSAMPDFARVYNFLGSIFDPETNG
Sb027895_Sorbi1 -AGTPGPNNFCSSSTEGPPRTWQPGETNDQINQVPSLRLMPDFAEVYSFLGSVFDPSTSG
                 *     **   ..      :  .   .::  . *    **:**.**.*:**:***.*.*

AT4G01280.1     HLQRLKQMDPINMETVLLLMQNLSVNLTSPEFAEQRRLISSYSAK-------------AL
Sb033225_Sorbi1 HLQQLKEMDPIDAETVLLLMKNLSINLTSPNFEEHRRLLSSHASSMDQEMGSSH-----I
Sb027895_Sorbi1 HLQKLKEMNPIDVETALLLMRNLSINLTSPDFEDQRKLLSSYSTSDGLQLGSSRSSALAM
                ***:**:*:**: **.****:***:*****:* ::*:*:**:::.              :

AT4G01280.1     K--------
Sb033225_Sorbi1 HLPFMITSK
Sb027895_Sorbi1 STPFM----
BoxShade v3.31 C (beta, 970507) Output
AT4G01280.1     - - - - - - - - - - - - - - - - - M V S V N P R P K G F P V F D S S N M S L P S S D G F G - - - - - - - - - - - - - - -
Sb033225_Sorbi1    G L R Y A T R K E E Q E G S G R S M V S M S T T P - - - H P L D P S V - - - P A V A G G G K E E E E E A G R A R E E A A
Sb027895_Sorbi1    - - - - - - - - D P S P L T F L S M V S A S A P P - - - P P L Q S D - - - - - - A A G S G - - - - - - - - - - - - - - -
 
AT4G01280.1     - - - S I P A T G R T S T V S F S - - E D P T T K I R K P Y T I K K S R E N W T D Q E H D K F L E A L H L F D R D W K K
Sb033225_Sorbi1    A A A A A P A A V P V P T V G N D D D D D G P R R V R K P Y T I T K S R E S W T D P E H D K F L E A L Q L F D R D W K K
Sb027895_Sorbi1    - - - - - - - - - - - - - - - - - - - E D A S K K V R K P Y T I T K S R E S W T E Q E H D K F L E A L Q L F D R D W K K
 
AT4G01280.1     I E A F V G S K T V V Q I R S H A Q K Y F L K V Q K S G A N E H L P P P R P K R K A S H P Y P I K A P K N V A Y T S L P
Sb033225_Sorbi1    I E A Y V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H L P P P R P K R K A A H P Y P H K A S K K - - - - - - -
Sb027895_Sorbi1    I E A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T S E H V P P P R P K R K A A H P Y P Q K A S K N - - - - - - -
 
AT4G01280.1     S S S T L P L L E P G Y L Y S S D S K S L M G N - - - - - Q A V C A S T S S S W N H E S T N - - L P K P V I E E E P G V
Sb033225_Sorbi1    - - - - - - - - A L Q V V L P Q Q A S H I M E Q G C G T P M D T A T V A T D S S A N D A F P - - V Q H F S P R H T Q G -
Sb027895_Sorbi1    - - - - - - - - E P N Y G L K T D S S S I H R N - - - - - - S G M N V S V S S W A H S S I P Q A V A S T M V K E D L G -
 
AT4G01280.1     S A T A P L P N N R C R Q E D T E R V R A - V T K P N N E E S C E K P H - R V M P N F A E V Y S F I G S V F D P N T S G
Sb033225_Sorbi1    - A T Y - - - N N - - S S S I G S Q S G T W P T S E G T E Q D I R H P A L S A M P D F A R V Y N F L G S I F D P E T N G
Sb027895_Sorbi1    - A G T P G P N N F C S S S T E G P P R T W Q P G E T N D Q I N Q V P S L R L M P D F A E V Y S F L G S V F D P S T S G
 
AT4G01280.1     H L Q R L K Q M D P I N M E T V L L L M Q N L S V N L T S P E F A E Q R R L I S S Y S A K - - - - - - - - - - - - - A L
Sb033225_Sorbi1    H L Q Q L K E M D P I D A E T V L L L M K N L S I N L T S P N F E E H R R L L S S H A S S M D Q E M G S S H - - - - - I
Sb027895_Sorbi1    H L Q K L K E M N P I D V E T A L L L M R N L S I N L T S P D F E D Q R K L L S S Y S T S D G L Q L G S S R S S A L A M
 
AT4G01280.1     K - - - - - - - -
Sb033225_Sorbi1    H L P F M I T S K
Sb027895_Sorbi1    S T P F M - - - -
 
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