fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G01280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm043731 not found in 332aa AT5G52660.2 1st_not 0.539115646 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G01280.1     MVSVNPRP-KGFPVFDSSNMSLPSSDGFGSI-----PATGRTSTVSFSEDPTTKIRKPYT
gm043731_Glyma1 MVSVNPNPAQGFYFFDPSNMTLP---GVNNLPPPPPPAPAAPSAV---EDPNKKIRKPYT
                ******.* :** .**.***:**   *...:     **.. .*:*   ***..*******

AT4G01280.1     IKKSRENWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVVQIRSHAQKYFLKVQKSGANE
gm043731_Glyma1 ITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSE
                *.****.**:**********:******************:***************.*:.*

AT4G01280.1     HLPPPRPKRKASHPYPIKAPKNVAYTSL--PSSSTLPLLEPGYLYSSDSKSLMGNQAVCA
gm043731_Glyma1 HVPPPRPKRKAARPYPQKAPKTPTVSQVMGPLQSSSAFIEPAYIYSPDSSSVLGT-PVTN
                *:*********::*** ****. : :.:  * .*: .::**.*:**.**.*::*. .*  

AT4G01280.1     STSSSWNHEST----NLPKPVIEEEPGVSA---TAPLPNNRC---RQEDTERVRAVTKPN
gm043731_Glyma1 MPLSSWNYNTTPQPGNVPQ-VTRDDMGLTGAGQAAPL--NCCYSSSNESTPPTWPRSKRI
                 . ****:::*    *:*: * .:: *::.   :***  * *    :*.*  . . :*  

AT4G01280.1     NEESCEKPHRVMPNFAEVYSFIGSVFDPNTSGHLQRLKQMDPINMETVLLLMQNLSVNLT
gm043731_Glyma1 NQGDQGKPIKVMPDFAQVYSFIGSVFDPNSTNHLQKLQQMDPINVETVLLLMTNLSVNLM
                *: .  ** :***:**:************::.***:*:******:******* ****** 

AT4G01280.1     SPEFAEQRRLISSYSAKALK----------------------
gm043731_Glyma1 SPEFEDHKRLLSSYDTDSDKSKFVNICSKSFTNKSESAVLSA
                **** :::**:***.:.: *
BoxShade v3.31 C (beta, 970507) Output
AT4G01280.1     M V S V N P R P - K G F P V F D S S N M S L P S S D G F G S I - - - - - P A T G R T S T V S F S E D P T T K I R K P Y T
gm043731_Glyma1    M V S V N P N P A Q G F Y F F D P S N M T L P - - - G V N N L P P P P P P A P A A P S A V - - - E D P N K K I R K P Y T
 
AT4G01280.1     I K K S R E N W T D Q E H D K F L E A L H L F D R D W K K I E A F V G S K T V V Q I R S H A Q K Y F L K V Q K S G A N E
gm043731_Glyma1    I T K S R E S W T E Q E H D K F L E A L Q L F D R D W K K I E A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T S E
 
AT4G01280.1     H L P P P R P K R K A S H P Y P I K A P K N V A Y T S L - - P S S S T L P L L E P G Y L Y S S D S K S L M G N Q A V C A
gm043731_Glyma1    H V P P P R P K R K A A R P Y P Q K A P K T P T V S Q V M G P L Q S S S A F I E P A Y I Y S P D S S S V L G T - P V T N
 
AT4G01280.1     S T S S S W N H E S T - - - - N L P K P V I E E E P G V S A - - - T A P L P N N R C - - - R Q E D T E R V R A V T K P N
gm043731_Glyma1    M P L S S W N Y N T T P Q P G N V P Q - V T R D D M G L T G A G Q A A P L - - N C C Y S S S N E S T P P T W P R S K R I
 
AT4G01280.1     N E E S C E K P H R V M P N F A E V Y S F I G S V F D P N T S G H L Q R L K Q M D P I N M E T V L L L M Q N L S V N L T
gm043731_Glyma1    N Q G D Q G K P I K V M P D F A Q V Y S F I G S V F D P N S T N H L Q K L Q Q M D P I N V E T V L L L M T N L S V N L M
 
AT4G01280.1     S P E F A E Q R R L I S S Y S A K A L K - - - - - - - - - - - - - - - - - - - - - -
gm043731_Glyma1    S P E F E D H K R L L S S Y D T D S D K S K F V N I C S K S F T N K S E S A V L S A
 
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