fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G01460.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016950 not found in 324aa AT4G01460.1 1st_1st 0.399610136 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G01460.1     ---MSGLMSFGELEDQ------FGQ----------------ISDTTMEEKIPFLQMLQCI
pt016950_POPTR_ MERLQGPINSCFLEEHSLDLGCFDQVFINTESLRFEEEEPHISSPSFEDKMPFLQMLQTV
                   :.* :.   **::      *.*                **..::*:*:******* :

AT4G01460.1     EHP--FTTTEPNQFLQSLLQIQTLESKSCLTLETNIKRDPGQTDD---PEKDPRTE----
pt016950_POPTR_ ETPPFFPYKEPS--FQTLLKLQHLQK-------------PWNMNTFYMPETDTQVQPLEL
                * *  *. .**.  :*:**::* *:.             * : :    **.*.:.:    

AT4G01460.1     NGAVTVKEKRKRKRTRAPKNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQR
pt016950_POPTR_ ESCVTHDIRRKRKRTRATKNKEEVESQRMNHIAVERNRRRLMNDHLNSLRSLMTPSYIQK
                :..** . :********.***:***.***.********** **:*********.**::*:

AT4G01460.1     GDQASIVGGAIDFIKELEQLLQSLEAEKRKDGTDETPKTASCS----SSSSLAC------
pt016950_POPTR_ GDQASIIGGAIDFVKELEQLVQSLEAQK-KIREIETASTAGISPNQYSTSQPQCDLLLEE
                ******:******:******:*****:* *    **..**. *    *:*.  *      

AT4G01460.1     --TNSSISSVSTTSENGFTARFGGGDTTEVEATVIQNHVSLKVRCKRGKRQILKAIVSIE
pt016950_POPTR_ GGTCEEERTVKKKSE-----------ATEIEVAAVQNHVNLKIKCQRIPGQLLRAIVALE
                  * ..  :*...**           :**:*.:.:****.**::*:*   *:*:***::*

AT4G01460.1     ELKLAILHLTISSSFDFVIYSFNLKMEDGCKLGSADEIATAVHQIFEQINGEVMWSNLSR
pt016950_POPTR_ DLGLTVLHLNITSSQATVLYSFNLKLEDNCKLGSTDEVAAAAHQIFSSING---------
                :* *::***.*:**   *:******:**.*****:**:*:*.****..***         

AT4G01460.1     T
pt016950_POPTR_ -
BoxShade v3.31 C (beta, 970507) Output
AT4G01460.1     - - - M S G L M S F G E L E D Q - - - - - - F G Q - - - - - - - - - - - - - - - - I S D T T M E E K I P F L Q M L Q C I
pt016950_POPTR_    M E R L Q G P I N S C F L E E H S L D L G C F D Q V F I N T E S L R F E E E E P H I S S P S F E D K M P F L Q M L Q T V
 
AT4G01460.1     E H P - - F T T T E P N Q F L Q S L L Q I Q T L E S K S C L T L E T N I K R D P G Q T D D - - - P E K D P R T E - - - -
pt016950_POPTR_    E T P P F F P Y K E P S - - F Q T L L K L Q H L Q K - - - - - - - - - - - - - P W N M N T F Y M P E T D T Q V Q P L E L
 
AT4G01460.1     N G A V T V K E K R K R K R T R A P K N K D E V E N Q R M T H I A V E R N R R R Q M N E H L N S L R S L M P P S F L Q R
pt016950_POPTR_    E S C V T H D I R R K R K R T R A T K N K E E V E S Q R M N H I A V E R N R R R L M N D H L N S L R S L M T P S Y I Q K
 
AT4G01460.1     G D Q A S I V G G A I D F I K E L E Q L L Q S L E A E K R K D G T D E T P K T A S C S - - - - S S S S L A C - - - - - -
pt016950_POPTR_    G D Q A S I I G G A I D F V K E L E Q L V Q S L E A Q K - K I R E I E T A S T A G I S P N Q Y S T S Q P Q C D L L L E E
 
AT4G01460.1     - - T N S S I S S V S T T S E N G F T A R F G G G D T T E V E A T V I Q N H V S L K V R C K R G K R Q I L K A I V S I E
pt016950_POPTR_    G G T C E E E R T V K K K S E - - - - - - - - - - - A T E I E V A A V Q N H V N L K I K C Q R I P G Q L L R A I V A L E
 
AT4G01460.1     E L K L A I L H L T I S S S F D F V I Y S F N L K M E D G C K L G S A D E I A T A V H Q I F E Q I N G E V M W S N L S R
pt016950_POPTR_    D L G L T V L H L N I T S S Q A T V L Y S F N L K L E D N C K L G S T D E V A A A A H Q I F S S I N G - - - - - - - - -
 
AT4G01460.1     T
pt016950_POPTR_    -
 
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