fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G01680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017970 not found in 464aa AT1G09540.1 1st_not 0.413946587 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G01680.1     MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQAGLQRCGKSCRLRWINY
pt017970_POPTR_ MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINY
                ***************************:********************************

AT4G01680.1     LRPDLKRGAFSQDEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRLRG
pt017970_POPTR_ LRPDLKRGTFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRG
                ********:***:******************************************** **

AT4G01680.1     IDPVTHKLLTEIETGTDDKTKPVEKSQQT-------------------------------
pt017970_POPTR_ IDPVTHKPLSEVENG-EDKNPPASGTQDKASAVSNTELNLLKADNSKSSGANLQEKRSSP
                ******* *:*:*.* :**. *.. :*:.                               

AT4G01680.1     -----YLVETDGSSSTTTCSTNQNNNTDHL------------------------------
pt017970_POPTR_ ISPNGYQLERESTSGSKVMNGNGNNTNDHVNNNLMTPTSNKDFFLDRFTASHHQGSTSNC
                     * :* :.:*.:.. . * **..**:                              

AT4G01680.1     ----YTGNFGFQRLSLENGSRIAAGSDLGIWIPQTGRNHHHHVD---ETIPSAVVLPGSM
pt017970_POPTR_ QPSDFVGHFPLQQLNYASNARLATNSIPSLWLSQTSKAFDMNSEFSSTAIPS--ILPPAV
                    :.*:* :*:*.  ..:*:*:.*  .:*:.**.: .. : :    :***  :** ::

AT4G01680.1     FSSGLTGYRSSNLGL-----IELEN----SFSTGPMMTEHQQIQESNYN-----------
pt017970_POPTR_ TSS----FHSTSMSYKPSITVSPDNPSLPSFTTNSCRLWETGTPRSNSNSNTVSNGSTEL
                 **    ::*:.:.      :. :*    **:*..    .    .** *           

AT4G01680.1     --NSTFFGNGNLNWGL----------------TMEEN-------QNPF----TISNHSNS
pt017970_POPTR_ QSNSSFFENAIFSWGLGECGSAEKEAQNHLMGSQHEDIKWPEYLQNPLLMAAALQNQNQQ
                  **:** *. :.***                : .*:       ***:    ::.*:.:.

AT4G01680.1     SLYSDIKSETNFFGTEATNVGMWPCN--QLQPQQH-------------AYGHI
pt017970_POPTR_ SLYNEIKSETQVV-TENSS-GMWPHNHQQQQPLQNPDICPRDIQRITASYGYI
                ***.:*****:.. ** :. **** *  * ** *:             :**:*
BoxShade v3.31 C (beta, 970507) Output
AT4G01680.1     M G R H S C C Y K Q K L R K G L W S P E E D E K L L R Y I T K Y G H G C W S S V P K Q A G L Q R C G K S C R L R W I N Y
pt017970_POPTR_    M G R H S C C Y K Q K L R K G L W S P E E D E K L L R H I T K Y G H G C W S S V P K Q A G L Q R C G K S C R L R W I N Y
 
AT4G01680.1     L R P D L K R G A F S Q D E E N L I I E L H A V L G N R W S Q I A A Q L P G R T D N E I K N L W N S C L K K K L R L R G
pt017970_POPTR_    L R P D L K R G T F S Q Q E E N L I I E L H A V L G N R W S Q I A A Q L P G R T D N E I K N L W N S C L K K K L R Q R G
 
AT4G01680.1     I D P V T H K L L T E I E T G T D D K T K P V E K S Q Q T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt017970_POPTR_    I D P V T H K P L S E V E N G - E D K N P P A S G T Q D K A S A V S N T E L N L L K A D N S K S S G A N L Q E K R S S P
 
AT4G01680.1     - - - - - Y L V E T D G S S S T T T C S T N Q N N N T D H L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt017970_POPTR_    I S P N G Y Q L E R E S T S G S K V M N G N G N N T N D H V N N N L M T P T S N K D F F L D R F T A S H H Q G S T S N C
 
AT4G01680.1     - - - - Y T G N F G F Q R L S L E N G S R I A A G S D L G I W I P Q T G R N H H H H V D - - - E T I P S A V V L P G S M
pt017970_POPTR_    Q P S D F V G H F P L Q Q L N Y A S N A R L A T N S I P S L W L S Q T S K A F D M N S E F S S T A I P S - - I L P P A V
 
AT4G01680.1     F S S G L T G Y R S S N L G L - - - - - I E L E N - - - - S F S T G P M M T E H Q Q I Q E S N Y N - - - - - - - - - - -
pt017970_POPTR_    T S S - - - - F H S T S M S Y K P S I T V S P D N P S L P S F T T N S C R L W E T G T P R S N S N S N T V S N G S T E L
 
AT4G01680.1     - - N S T F F G N G N L N W G L - - - - - - - - - - - - - - - - T M E E N - - - - - - - Q N P F - - - - T I S N H S N S
pt017970_POPTR_    Q S N S S F F E N A I F S W G L G E C G S A E K E A Q N H L M G S Q H E D I K W P E Y L Q N P L L M A A A L Q N Q N Q Q
 
AT4G01680.1     S L Y S D I K S E T N F F G T E A T N V G M W P C N - - Q L Q P Q Q H - - - - - - - - - - - - - A Y G H I
pt017970_POPTR_    S L Y N E I K S E T Q V V - T E N S S - G M W P H N H Q Q Q Q P L Q N P D I C P R D I Q R I T A S Y G Y I
 
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