fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G01680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt014860 not found in 446aa AT1G09540.1 not_not 0.400593471 III
Pt038377 not found in 464aa AT1G09540.1 not_not 0.400593471 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G01680.1     MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQAGLQRCGKSCRLRWINY
pt038377_POPTR_ MGRHSCCYKQKLRKGLWSPEEDEKLLSHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINY
pt014860_POPTR_ MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGLGCWSSVPKLAGLQRCGKSCRLRWINY
                ************************** :***:* ******** *****************

AT4G01680.1     LRPDLKRGAFSQDEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRLRG
pt038377_POPTR_ LRPDLKRGTFSHLEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLKQRG
pt014860_POPTR_ LRPDLKRGAFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQRG
                ********:**: **************************************:****: **

AT4G01680.1     IDPVTHKLLTEIETGTDDKTKPVEKSQ---------QTYLVETD-----------GSSST
pt038377_POPTR_ IDPVTHKPLSEVEDGEDKNP-AASRNQDKASAVSNTELNLLKADHSKPLGANLQEKRSSS
pt014860_POPTR_ IDPNTHKSLSEAEDGKGKQQLTADKSNEKVSIVSN-ELNLIKTATLKPPAVS---SRSSN
                *** *** *:* * * ..:  ...:.:         :  *:::              **.

AT4G01680.1     TT---------------CSTNQNNNTDHLYTGN---------------------------
pt038377_POPTR_ ISPHGNQLERESTSSFKAMNENNNNTNDHGNNNLMTPTSNKDFFFDRFTAFLHEGSTSNC
pt014860_POPTR_ VI------------------TTNNNKDRSGSSNLTNVPPTQEFFLDRFGTSHESSTTASC
                                      ***.:   ..*                           

AT4G01680.1     --------FGFQRLSLENGSRIAAGSDLGIWIPQTGRNH---HHHVDETIPSAVVLPG--
pt038377_POPTR_ PPSGFVGHFPLQQLNYASNARLATNSIPSLWLSQTSKAFGM-NCEFSSTMIPSIPPPAVT
pt014860_POPTR_ MPSDLMDYFPFQKLDYKPIIDLSMNPNSTLCFNPNSSSSEMISHEFNSSMTPPTILPSVS
                        * :*:*.      :: ..   : :  ..        ....:: ..   *.  

AT4G01680.1     -SMFSSGL---------------------TGYRSSNLGLIELENSFSTGPMMTEHQQIQE
pt038377_POPTR_ SSFLSSSMGYKPSITVPPD-NPSLPSFTTNSYRPWETGAPSNNSNSSTGSNGSTELQ---
pt014860_POPTR_ TSMFQTPICVKPSVSLPSDHNPSVGSCDVNGVQNWEASSFSNNGSGSNGSSSSIELQ---
                 *::.: :                     .. :  : .  . :.. *.*.  : . *   

AT4G01680.1     SNYNNSTFFGNGNLNWGL-----TMEENQ-------------------NPF----TISNH
pt038377_POPTR_ ---SNSSFFENTIFSWGLGDCSSTEKEAQ-NHLIGSQQEDIRWPEYLQNPLLMAASLQNQ
pt014860_POPTR_ ---SNTNFFESSAFSWGLADCGKSSDEAHLRSLANETVEDIKWSEYLSTPFFLGSTIQNQ
                   .*:.** .  :.***     : .* :                   .*:    ::.*:

AT4G01680.1     SNSSLYSDIKSETNFFGTEATNVGMWPCNQLQPQQ---------------HAYGHI-
pt038377_POPTR_ NQQSLYNEIKTETHLLTENPS--GMWPDNQQEQEPLQNPDICPKDMQRITASYGYV-
pt014860_POPTR_ TSQHVYSEVKPETHFIAQGSS--TSWLKNQHQQAS-QPADIYTKDLQRLAVAFGQSI
                ... :*.::*.**:::   .:    *  ** :                   ::*
BoxShade v3.31 C (beta, 970507) Output
AT4G01680.1     M G R H S C C Y K Q K L R K G L W S P E E D E K L L R Y I T K Y G H G C W S S V P K Q A G L Q R C G K S C R L R W I N Y
pt038377_POPTR_    M G R H S C C Y K Q K L R K G L W S P E E D E K L L S H I T K Y G H G C W S S V P K Q A G L Q R C G K S C R L R W I N Y
pt014860_POPTR_    M G R H S C C Y K Q K L R K G L W S P E E D E K L L N Y I T K H G L G C W S S V P K L A G L Q R C G K S C R L R W I N Y
 
AT4G01680.1     L R P D L K R G A F S Q D E E N L I I E L H A V L G N R W S Q I A A Q L P G R T D N E I K N L W N S C L K K K L R L R G
pt038377_POPTR_    L R P D L K R G T F S H L E E N L I I E L H A V L G N R W S Q I A A Q L P G R T D N E I K N L W N S C L K K K L K Q R G
pt014860_POPTR_    L R P D L K R G A F S Q Q E E N L I I E L H A V L G N R W S Q I A A Q L P G R T D N E I K N L W N S C I K K K L R Q R G
 
AT4G01680.1     I D P V T H K L L T E I E T G T D D K T K P V E K S Q - - - - - - - - - Q T Y L V E T D - - - - - - - - - - - G S S S T
pt038377_POPTR_    I D P V T H K P L S E V E D G E D K N P - A A S R N Q D K A S A V S N T E L N L L K A D H S K P L G A N L Q E K R S S S
pt014860_POPTR_    I D P N T H K S L S E A E D G K G K Q Q L T A D K S N E K V S I V S N - E L N L I K T A T L K P P A V S - - - S R S S N
 
AT4G01680.1     T T - - - - - - - - - - - - - - - C S T N Q N N N T D H L Y T G N - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt038377_POPTR_    I S P H G N Q L E R E S T S S F K A M N E N N N N T N D H G N N N L M T P T S N K D F F F D R F T A F L H E G S T S N C
pt014860_POPTR_    V I - - - - - - - - - - - - - - - - - - T T N N N K D R S G S S N L T N V P P T Q E F F L D R F G T S H E S S T T A S C
 
AT4G01680.1     - - - - - - - - F G F Q R L S L E N G S R I A A G S D L G I W I P Q T G R N H - - - H H H V D E T I P S A V V L P G - -
pt038377_POPTR_    P P S G F V G H F P L Q Q L N Y A S N A R L A T N S I P S L W L S Q T S K A F G M - N C E F S S T M I P S I P P P A V T
pt014860_POPTR_    M P S D L M D Y F P F Q K L D Y K P I I D L S M N P N S T L C F N P N S S S S E M I S H E F N S S M T P P T I L P S V S
 
AT4G01680.1     - S M F S S G L - - - - - - - - - - - - - - - - - - - - - T G Y R S S N L G L I E L E N S F S T G P M M T E H Q Q I Q E
pt038377_POPTR_    S S F L S S S M G Y K P S I T V P P D - N P S L P S F T T N S Y R P W E T G A P S N N S N S S T G S N G S T E L Q - - -
pt014860_POPTR_    T S M F Q T P I C V K P S V S L P S D H N P S V G S C D V N G V Q N W E A S S F S N N G S G S N G S S S S I E L Q - - -
 
AT4G01680.1     S N Y N N S T F F G N G N L N W G L - - - - - T M E E N Q - - - - - - - - - - - - - - - - - - - N P F - - - - T I S N H
pt038377_POPTR_    - - - S N S S F F E N T I F S W G L G D C S S T E K E A Q - N H L I G S Q Q E D I R W P E Y L Q N P L L M A A S L Q N Q
pt014860_POPTR_    - - - S N T N F F E S S A F S W G L A D C G K S S D E A H L R S L A N E T V E D I K W S E Y L S T P F F L G S T I Q N Q
 
AT4G01680.1     S N S S L Y S D I K S E T N F F G T E A T N V G M W P C N Q L Q P Q Q - - - - - - - - - - - - - - - H A Y G H I -
pt038377_POPTR_    N Q Q S L Y N E I K T E T H L L T E N P S - - G M W P D N Q Q E Q E P L Q N P D I C P K D M Q R I T A S Y G Y V -
pt014860_POPTR_    T S Q H V Y S E V K P E T H F I A Q G S S - - T S W L K N Q H Q Q A S - Q P A D I Y T K D L Q R L A V A F G Q S I
 
0