fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G01680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm052954 not found in 415aa AT4G01680.1 1st_1st 0.422848664 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G01680.1     MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQAGLQRCGKSCRLRWINY
gm052954_Glyma1 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINY
                ***************************:********************************

AT4G01680.1     LRPDLKRGAFSQDEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRLRG
gm052954_Glyma1 LRPDLKRGTFSQEEETLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRG
                ********:***:**.***************************************** **

AT4G01680.1     IDPVTHKLLTEIETGTDDKTKPVEKSQQTYLV------------ETDGSSSTT-------
gm052954_Glyma1 IDPVTHKPLSEVENGEEDKTRSQELSNELNLLNSESFKSDEGSYEQRASSSIAPKAYEME
                ******* *:*:*.* :***:. * *::  *:            *  .*** :       

AT4G01680.1     -TCSTNQN---NNTDHL------------YT---------GNFGFQRLSLENGSRIAAGS
gm052954_Glyma1 GSCSSKINTTKNDTNLMSNCSNKDMFLDSYTTSCQPSDLMGNY-----PLQITDTLPTNS
                 :**:: *   *:*: :            **         **:     .*:  . :.:.*

AT4G01680.1     DLGIWIPQTGRNHHHHVDETIPSAVV----------LPGSMFSSGLTGYRSSNLGLIELE
gm052954_Glyma1 NSCHWFSQTARPFDMNSEFTITSNVMSILPPTTTSFLPSTSFC-----YKPS-LGVPSED
                :   *:.**.* .. : : **.* *:          **.: *.     *:.* **: . :

AT4G01680.1     NSFST----GPMMTEHQQIQESNYNNSTFFGNGNL-----------NWGLTMEEN-----
gm052954_Glyma1 ISTASFALNGPNYWEASASNNSNGSNNTSDGSRELTTTSSKNSVLSSWGLTEETKWSEYL
                 * ::    **   * .  ::** .*.*  *. :*           .**** * :     

AT4G01680.1     QNPFTISNHSNSSLYSDIKSETNFFGTEATNVGMWPCNQLQPQQH---------------
gm052954_Glyma1 QNPMLMLA-APESLCNQIRPATHLVPDNTLGSIIVPDSKDQQQQQQSQNSSIFSKDTQKL
                ***: :   : .** .:*:. *::.  :: .  : * .: * **:               

AT4G01680.1     --AYGHI
gm052954_Glyma1 TAAFGHI
                  *:***
BoxShade v3.31 C (beta, 970507) Output
AT4G01680.1     M G R H S C C Y K Q K L R K G L W S P E E D E K L L R Y I T K Y G H G C W S S V P K Q A G L Q R C G K S C R L R W I N Y
gm052954_Glyma1    M G R H S C C Y K Q K L R K G L W S P E E D E K L L R H I T K Y G H G C W S S V P K Q A G L Q R C G K S C R L R W I N Y
 
AT4G01680.1     L R P D L K R G A F S Q D E E N L I I E L H A V L G N R W S Q I A A Q L P G R T D N E I K N L W N S C L K K K L R L R G
gm052954_Glyma1    L R P D L K R G T F S Q E E E T L I I E L H A V L G N R W S Q I A A Q L P G R T D N E I K N L W N S C L K K K L R Q R G
 
AT4G01680.1     I D P V T H K L L T E I E T G T D D K T K P V E K S Q Q T Y L V - - - - - - - - - - - - E T D G S S S T T - - - - - - -
gm052954_Glyma1    I D P V T H K P L S E V E N G E E D K T R S Q E L S N E L N L L N S E S F K S D E G S Y E Q R A S S S I A P K A Y E M E
 
AT4G01680.1     - T C S T N Q N - - - N N T D H L - - - - - - - - - - - - Y T - - - - - - - - - G N F G F Q R L S L E N G S R I A A G S
gm052954_Glyma1    G S C S S K I N T T K N D T N L M S N C S N K D M F L D S Y T T S C Q P S D L M G N Y - - - - - P L Q I T D T L P T N S
 
AT4G01680.1     D L G I W I P Q T G R N H H H H V D E T I P S A V V - - - - - - - - - - L P G S M F S S G L T G Y R S S N L G L I E L E
gm052954_Glyma1    N S C H W F S Q T A R P F D M N S E F T I T S N V M S I L P P T T T S F L P S T S F C - - - - - Y K P S - L G V P S E D
 
AT4G01680.1     N S F S T - - - - G P M M T E H Q Q I Q E S N Y N N S T F F G N G N L - - - - - - - - - - - N W G L T M E E N - - - - -
gm052954_Glyma1    I S T A S F A L N G P N Y W E A S A S N N S N G S N N T S D G S R E L T T T S S K N S V L S S W G L T E E T K W S E Y L
 
AT4G01680.1     Q N P F T I S N H S N S S L Y S D I K S E T N F F G T E A T N V G M W P C N Q L Q P Q Q H - - - - - - - - - - - - - - -
gm052954_Glyma1    Q N P M L M L A - A P E S L C N Q I R P A T H L V P D N T L G S I I V P D S K D Q Q Q Q Q Q S Q N S S I F S K D T Q K L
 
AT4G01680.1     - - A Y G H I
gm052954_Glyma1    T A A F G H I
 
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