fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G02590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os015355 GDQPFSLALSLDAAAA in 43/294 AT4G02590.2 1st_not 0.424124513 II
Sb020044 not found in 567aa AT4G02590.3 1st_not 0.424124513 II
Gm052263 HAPVYQLGLSLDQGKG in 70/292 AT4G02590.2 1st_not 0.686770428 II
Pt001062 not found in 300aa AT4G02590.2 1st_not 0.671206225 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G02590.1     ------MASNNPHDNLSDQTPSDDFFEQILGLP---NFSASSAAGLSGVDGGLGGGA---
Sb020044_Sorbi1 APRCQDMAGQPPPQG-----PEDDFFDQFFSMAAGGSYPATAGGGRAPGD---------Q
Os015355_Os03t0 ------MAGQQPQQQG---PPEDDFFDQFFSLTS--SFPGAAPGGRAAGD---------Q
pt001062_POPTR_ -------MANNPTE-----PPTDDFLQEILGMP---NF-ASAEAGLVGADAGLAGAAAAQ
gm052263_Glyma1 -------MANNPSD-----APADDFLEQILGLP---NF-ASADSGLSAADVGLAG-AATQ
                        .: * :      * ***:::::.:.   .: .:: .*    *          

AT4G02590.1     PPMMLQLGSGEEGSHMGGLGGS---GPTGFHNQMFPLGLSLDQGKGPGFLRPEGGHGSGK
Sb020044_Sorbi1 P---------------------------------FSLALSLD-AAA------AEASGSGK
Os015355_Os03t0 P---------------------------------FSLALSLDAAAA------AEASGSGK
pt001062_POPTR_ ASMMLQLSSGDGSGHISDLGGAPGGGSAGFHG--FPLGLSLEQGKG-GFLKPEEASGSGK
gm052263_Glyma1 APMMLQLNSADANAHLA---------GAAFHAPVYQLGLSLDQGKG-GFMKPEEASASGK
                .                                 : *.***: . .        . .***

AT4G02590.1     RF-----SDDV---VDNRCSS----MKPVF-HG-------------------QPMQQPPP
Sb020044_Sorbi1 H------ADGG---KDREAVQLPGLFPPVF-SGGVQPPHLRPNPPTQVFRAQQPKQGGAG
Os015355_Os03t0 RLGVGDDAEGGGSKADRETVQLTGLFPPVFGGGGVQPPNLRPTPPTQVFHPQQSKQGGAA
pt001062_POPTR_ RF-----RDEI---VDGRA-------KNVF-HG-------------------QPMPTTVA
gm052263_Glyma1 RF-----RDDV---VDNRA-------KNVF-HG-------------------QPMPTTMP
                :       :      * .          **  *                   *.      

AT4G02590.1     SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDE
Sb020044_Sorbi1 VGPQ-PPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAVMLDE
Os015355_Os03t0 VGPQ-PPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDE
pt001062_POPTR_ IAPH-PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRATMLDE
gm052263_Glyma1 AAPH-PPAIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDE
                 .*: *.: **:**************************:********..******.*:**

AT4G02590.1     IVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVEDETGEGGRTPQPAWEKWSND
Sb020044_Sorbi1 ILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPL--SVKGEASDSGSK-QQIWEKWSTD
Os015355_Os03t0 ILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPL--SVKGEASDSGGN-QQIWEKWSTD
pt001062_POPTR_ IVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPL-SSVEDETGEGGRN-QPAWEKWSND
gm052263_Glyma1 IVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPL-SSVEEEGGEGARN-RPAWDKWSND
                *:************************* **:*:**  **: * .:.. . :  *:***.*

AT4G02590.1     GTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSVVKPENNPPQ
Sb020044_Sorbi1 GTERQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYDTQHSQDGQPVKPEPNTPS
Os015355_Os03t0 GTERQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYDTQQTQDGQPVKHEPNTPS
pt001062_POPTR_ GTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHTQPPDTTTIVKPETNPPS
gm052263_Glyma1 GTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPPDTSSIVKPETNPPS
                ************::*****:*******:****** ***.:* .:    ** * *.*.
BoxShade v3.31 C (beta, 970507) Output
AT4G02590.1     - - - - - - M A S N N P H D N L S D Q T P S D D F F E Q I L G L P - - - N F S A S S A A G L S G V D G G L G G G A - - -
Sb020044_Sorbi1    A P R C Q D M A G Q P P P Q G - - - - - P E D D F F D Q F F S M A A G G S Y P A T A G G G R A P G D - - - - - - - - - Q
Os015355_Os03t0    - - - - - - M A G Q Q P Q Q Q G - - - P P E D D F F D Q F F S L T S - - S F P G A A P G G R A A G D - - - - - - - - - Q
pt001062_POPTR_    - - - - - - - M A N N P T E - - - - - P P T D D F L Q E I L G M P - - - N F - A S A E A G L V G A D A G L A G A A A A Q
gm052263_Glyma1    - - - - - - - M A N N P S D - - - - - A P A D D F L E Q I L G L P - - - N F - A S A D S G L S A A D V G L A G - A A T Q
 
AT4G02590.1     P P M M L Q L G S G E E G S H M G G L G G S - - - G P T G F H N Q M F P L G L S L D Q G K G P G F L R P E G G H G S G K
Sb020044_Sorbi1    P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F S L A L S L D - A A A - - - - - - A E A S G S G K
Os015355_Os03t0    P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F S L A L S L D A A A A - - - - - - A E A S G S G K
pt001062_POPTR_    A S M M L Q L S S G D G S G H I S D L G G A P G G G S A G F H G - - F P L G L S L E Q G K G - G F L K P E E A S G S G K
gm052263_Glyma1    A P M M L Q L N S A D A N A H L A - - - - - - - - - G A A F H A P V Y Q L G L S L D Q G K G - G F M K P E E A S A S G K
 
AT4G02590.1     R F - - - - - S D D V - - - V D N R C S S - - - - M K P V F - H G - - - - - - - - - - - - - - - - - - - Q P M Q Q P P P
Sb020044_Sorbi1    H - - - - - - A D G G - - - K D R E A V Q L P G L F P P V F - S G G V Q P P H L R P N P P T Q V F R A Q Q P K Q G G A G
Os015355_Os03t0    R L G V G D D A E G G G S K A D R E T V Q L T G L F P P V F G G G G V Q P P N L R P T P P T Q V F H P Q Q S K Q G G A A
pt001062_POPTR_    R F - - - - - R D E I - - - V D G R A - - - - - - - K N V F - H G - - - - - - - - - - - - - - - - - - - Q P M P T T V A
gm052263_Glyma1    R F - - - - - R D D V - - - V D N R A - - - - - - - K N V F - H G - - - - - - - - - - - - - - - - - - - Q P M P T T M P
 
AT4G02590.1     S A P H Q P T S I R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R I R A L Q E L V P T V N K T D R A A M I D E
Sb020044_Sorbi1    V G P Q - P P A P R P K V R A R R G Q A T D P H S I A E R L R R E R I A E R M R A L Q E L V P N T N K T D R A V M L D E
Os015355_Os03t0    V G P Q - P P A P R P K V R A R R G Q A T D P H S I A E R L R R E R I A E R M R A L Q E L V P N T N K T D R A A M L D E
pt001062_POPTR_    I A P H - P P A M R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R I R A L Q E L V P S V N K T D R A T M L D E
gm052263_Glyma1    A A P H - P P A I R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R I R A L Q E L V P S V N K T D R A A M L D E
 
AT4G02590.1     I V D Y V K F L R L Q V K V L S M S R L G G A G A V A P L V T D M P L S S S V E D E T G E G G R T P Q P A W E K W S N D
Sb020044_Sorbi1    I L D Y V K F L R L Q V K V L S M S R L G G A G A V A Q L V A D I P L - - S V K G E A S D S G S K - Q Q I W E K W S T D
Os015355_Os03t0    I L D Y V K F L R L Q V K V L S M S R L G G A G A V A Q L V A D I P L - - S V K G E A S D S G G N - Q Q I W E K W S T D
pt001062_POPTR_    I V D Y V K F L R L Q V K V L S M S R L G G A G A V A P L V T D I P L - S S V E D E T G E G G R N - Q P A W E K W S N D
gm052263_Glyma1    I V D Y V K F L R L Q V K V L S M S R L G G A G A V A P L V T D I P L - S S V E E E G G E G A R N - R P A W D K W S N D
 
AT4G02590.1     G T E R Q V A K L M E E N V G A A M Q L L Q S K A L C M M P I S L A M A I Y H S Q P P D T S S V V K P E N N P P Q
Sb020044_Sorbi1    G T E R Q V A K L M E E D I G A A M Q F L Q S K A L C M M P I S L A M A I Y D T Q H S Q D G Q P V K P E P N T P S
Os015355_Os03t0    G T E R Q V A K L M E E D I G A A M Q F L Q S K A L C M M P I S L A M A I Y D T Q Q T Q D G Q P V K H E P N T P S
pt001062_POPTR_    G T E R Q V A K L M E E N V G A A M Q F L Q S K A L C I M P I S L A T A I Y H T Q P P D T T T I V K P E T N P P S
gm052263_Glyma1    G T E R Q V A K L M E E N V G A A M Q F L Q S K A L C I M P I S L A S A I Y Q S Q P P D T S S I V K P E T N P P S
 
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