fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G02590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001062 not found in 300aa AT4G02590.2 1st_not 0.671206225 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G02590.1     MASNNPHDNLSDQTPSDDFFEQILGLPNFSASSAAGLSGVDGGLGGGA---PPMMLQLGS
pt001062_POPTR_ -MANNP-----TEPPTDDFLQEILGMPNF-ASAEAGLVGADAGLAGAAAAQASMMLQLSS
                  :***      :.*:***:::***:*** **: *** *.*.**.*.*   ..*****.*

AT4G02590.1     GEEGSHMGGLGGS---GPTGFHNQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDN
pt001062_POPTR_ GDGSGHISDLGGAPGGGSAGFHG--FPLGLSLEQGKG-GFLKPEEASGSGKRFRDEIVDG
                *: ..*:..***:   *.:***.  *******:**** ***:** . ****** *::**.

AT4G02590.1     RCSSMKPVFHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRA
pt001062_POPTR_ RA---KNVFHGQPMPTTVAIAPH-PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRA
                *.   * *******  . . *** *.::********************************

AT4G02590.1     LQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVED
pt001062_POPTR_ LQELVPSVNKTDRATMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPL-SSVED
                ******:*******:*:**********************************:** *****

AT4G02590.1     ETGEGGRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQ
pt001062_POPTR_ ETGEGGRN-QPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHTQ
                *******. *****************************:*******:****** ****:*

AT4G02590.1     PPDTSSVVKPENNPPQ
pt001062_POPTR_ PPDTTTIVKPETNPPS
                ****:::****.***.
BoxShade v3.31 C (beta, 970507) Output
AT4G02590.1     M A S N N P H D N L S D Q T P S D D F F E Q I L G L P N F S A S S A A G L S G V D G G L G G G A - - - P P M M L Q L G S
pt001062_POPTR_    - M A N N P - - - - - T E P P T D D F L Q E I L G M P N F - A S A E A G L V G A D A G L A G A A A A Q A S M M L Q L S S
 
AT4G02590.1     G E E G S H M G G L G G S - - - G P T G F H N Q M F P L G L S L D Q G K G P G F L R P E G G H G S G K R F S D D V V D N
pt001062_POPTR_    G D G S G H I S D L G G A P G G G S A G F H G - - F P L G L S L E Q G K G - G F L K P E E A S G S G K R F R D E I V D G
 
AT4G02590.1     R C S S M K P V F H G Q P M Q Q P P P S A P H Q P T S I R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R I R A
pt001062_POPTR_    R A - - - K N V F H G Q P M P T T V A I A P H - P P A M R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R I R A
 
AT4G02590.1     L Q E L V P T V N K T D R A A M I D E I V D Y V K F L R L Q V K V L S M S R L G G A G A V A P L V T D M P L S S S V E D
pt001062_POPTR_    L Q E L V P S V N K T D R A T M L D E I V D Y V K F L R L Q V K V L S M S R L G G A G A V A P L V T D I P L - S S V E D
 
AT4G02590.1     E T G E G G R T P Q P A W E K W S N D G T E R Q V A K L M E E N V G A A M Q L L Q S K A L C M M P I S L A M A I Y H S Q
pt001062_POPTR_    E T G E G G R N - Q P A W E K W S N D G T E R Q V A K L M E E N V G A A M Q F L Q S K A L C I M P I S L A T A I Y H T Q
 
AT4G02590.1     P P D T S S V V K P E N N P P Q
pt001062_POPTR_    P P D T T T I V K P E T N P P S
 
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