fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G02590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040111 not found in 300aa AT4G02590.2 not_not 0.657587548 III
Pt002016 not found in 331aa AT4G02590.2 not_not 0.464980544 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G02590.1     MASNNPHDNLSDQTPSDDFFEQILGLPNFSASSAAGLSGVDGGLGGGA--P---PMM-LQ
pt002016_POPTR_ -MAGNP----PPEGLGDDFFEQI-------------LAGQPPGYGGEAVGSTSLPMMGLQ
pt040111_POPTR_ -MANNP-----TEPPTDDFLQEILGMPNF-ASAEAGLVGADAGLAGTA--SVQAPMM-LQ
                  :.**      :   ***:::*             * *   * .* *  .   *** **

AT4G02590.1     LGSGEEGSHMGGLGGS---GPTGFHNQMFPLGLSLDQGKGPGFLRPEGGHGS--------
pt002016_POPTR_ LGS--SAANVGLMRSS-ANNNMG----MMPLGLNLEHH---GFLRQQQDDGSSSLDTNNS
pt040111_POPTR_ LSSGDGSGHISALGGAPGGGGAGFHG--FPLGLSLEQGKG-GFLKPEEASGS--------
                *.*   ..::. : .:   .  *     :****.*::    ***: :   **        

AT4G02590.1     --------------GKRFSDDVVDNRC----------SSMKPV-----------FHGQPM
pt002016_POPTR_ NNINNASPFSITSAGFLGRDSVHMTSLFPTFGQLQIHSSIRSAPPPLGPPQIHQFNSQPT
pt040111_POPTR_ --------------GNRFRDDIVDGR-------------VRNV-----------FHGQPM
                              *    *.:                 :: .           *:.** 

AT4G02590.1     QQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRA
pt002016_POPTR_ SGAVSAVPQ-PPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTDRA
pt040111_POPTR_ PTTVTAATH-PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRA
                  . .:..: *..:*********************** **:**::*******: ******

AT4G02590.1     AMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVEDETGEGGRTPQPAWE
pt002016_POPTR_ AMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPL-SSVQGEGIEGGAN-QQAWE
pt040111_POPTR_ AMLDEIVDYVKFLRLQVKILSMSRLGGAGAVAPLVTDIPL-SPVEDETGEGGRN-QLAWE
                **:***************:*******.***** **:*:** *.*:.*  *** . * ***

AT4G02590.1     KWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSVVKPENNP
pt002016_POPTR_ NWSNDGTEQEVAKLMEEDVGAAMQLLQSKALCIMPVSLASAIFRARPPNAPTLVKPESNP
pt040111_POPTR_ KWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPITLATAIYHTQPPDTTTIVKPETNP
                :*******::*******:******:*******:**::** **::::**::.::****.**

AT4G02590.1     PQ
pt002016_POPTR_ PS
pt040111_POPTR_ PS
                *.
BoxShade v3.31 C (beta, 970507) Output
AT4G02590.1     M A S N N P H D N L S D Q T P S D D F F E Q I L G L P N F S A S S A A G L S G V D G G L G G G A - - P - - - P M M - L Q
pt002016_POPTR_    - M A G N P - - - - P P E G L G D D F F E Q I - - - - - - - - - - - - - L A G Q P P G Y G G E A V G S T S L P M M G L Q
pt040111_POPTR_    - M A N N P - - - - - T E P P T D D F L Q E I L G M P N F - A S A E A G L V G A D A G L A G T A - - S V Q A P M M - L Q
 
AT4G02590.1     L G S G E E G S H M G G L G G S - - - G P T G F H N Q M F P L G L S L D Q G K G P G F L R P E G G H G S - - - - - - - -
pt002016_POPTR_    L G S - - S A A N V G L M R S S - A N N N M G - - - - M M P L G L N L E H H - - - G F L R Q Q Q D D G S S S L D T N N S
pt040111_POPTR_    L S S G D G S G H I S A L G G A P G G G G A G F H G - - F P L G L S L E Q G K G - G F L K P E E A S G S - - - - - - - -
 
AT4G02590.1     - - - - - - - - - - - - - - G K R F S D D V V D N R C - - - - - - - - - - S S M K P V - - - - - - - - - - - F H G Q P M
pt002016_POPTR_    N N I N N A S P F S I T S A G F L G R D S V H M T S L F P T F G Q L Q I H S S I R S A P P P L G P P Q I H Q F N S Q P T
pt040111_POPTR_    - - - - - - - - - - - - - - G N R F R D D I V D G R - - - - - - - - - - - - - V R N V - - - - - - - - - - - F H G Q P M
 
AT4G02590.1     Q Q P P P S A P H Q P T S I R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R I R A L Q E L V P T V N K T D R A
pt002016_POPTR_    S G A V S A V P Q - P P G I R P R V R A R R G Q A T D P H S I A E R L R R V R I T E R V K A L Q E L V P T C N K T D R A
pt040111_POPTR_    P T T V T A A T H - P P A M R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R I R A L Q E L V P S V N K T D R A
 
AT4G02590.1     A M I D E I V D Y V K F L R L Q V K V L S M S R L G G A G A V A P L V T D M P L S S S V E D E T G E G G R T P Q P A W E
pt002016_POPTR_    A M L D E I V D Y V K F L R L Q V K V L S M S R L G A A G A V A Q L V A D V P L - S S V Q G E G I E G G A N - Q Q A W E
pt040111_POPTR_    A M L D E I V D Y V K F L R L Q V K I L S M S R L G G A G A V A P L V T D I P L - S P V E D E T G E G G R N - Q L A W E
 
AT4G02590.1     K W S N D G T E R Q V A K L M E E N V G A A M Q L L Q S K A L C M M P I S L A M A I Y H S Q P P D T S S V V K P E N N P
pt002016_POPTR_    N W S N D G T E Q E V A K L M E E D V G A A M Q L L Q S K A L C I M P V S L A S A I F R A R P P N A P T L V K P E S N P
pt040111_POPTR_    K W S N D G T E R Q V A K L M E E N V G A A M Q F L Q S K A L C I M P I T L A T A I Y H T Q P P D T T T I V K P E T N P
 
AT4G02590.1     P Q
pt002016_POPTR_    P S
pt040111_POPTR_    P S
 
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