fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G02590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020044 not found in 567aa AT4G02590.3 1st_not 0.424124513 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G02590.1     ------MASNNPHDNLSDQTPSDDFFEQILGLPNFSASSAAGLSGVDGGLGGGAPPMMLQ
Sb020044_Sorbi1 APRCQDMAGQPP-----PQGPEDDFFDQFF-------SMAAG------------------
                      **.: *      * *.****:*::       * ***                  

AT4G02590.1     LGSGEEGSHMGGLGGSGPTGFHNQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDN
Sb020044_Sorbi1 ------GSYPATAGGGRAPG--DQPFSLALSLDAAAAE-------ASGSGKH-ADGGKDR
                      **: .  **. ..*  :* *.*.**** . .        . ****: :*.  *.

AT4G02590.1     RCSSM----KPVFHGQPMQQPPPSAPHQPTSI--------------------RPRVRARR
Sb020044_Sorbi1 EAVQLPGLFPPVFSGG--VQPPHLRPNPPTQVFRAQQPKQGGAGVGPQPPAPRPKVRARR
                .. .:     *** *    ***   *: **.:                    **:*****

AT4G02590.1     GQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSM
Sb020044_Sorbi1 GQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAVMLDEILDYVKFLRLQVKVLSM
                *********************:********..******.*:***:***************

AT4G02590.1     SRLGGAGAVAPLVTDMPLSSSVEDETGEGGRTPQPAWEKWSNDGTERQVAKLMEENVGAA
Sb020044_Sorbi1 SRLGGAGAVAQLVADIPL--SVKGEASDSG-SKQQIWEKWSTDGTERQVAKLMEEDIGAA
                ********** **:*:**  **:.*:.:.* : *  *****.*************::***

AT4G02590.1     MQLLQSKALCMMPISLAMAIYHSQPPDTSSVVKPENNPPQ
Sb020044_Sorbi1 MQFLQSKALCMMPISLAMAIYDTQHSQDGQPVKPEPNTPS
                **:******************.:* .: .. **** *.*.
BoxShade v3.31 C (beta, 970507) Output
AT4G02590.1     - - - - - - M A S N N P H D N L S D Q T P S D D F F E Q I L G L P N F S A S S A A G L S G V D G G L G G G A P P M M L Q
Sb020044_Sorbi1    A P R C Q D M A G Q P P - - - - - P Q G P E D D F F D Q F F - - - - - - - S M A A G - - - - - - - - - - - - - - - - - -
 
AT4G02590.1     L G S G E E G S H M G G L G G S G P T G F H N Q M F P L G L S L D Q G K G P G F L R P E G G H G S G K R F S D D V V D N
Sb020044_Sorbi1    - - - - - - G S Y P A T A G G G R A P G - - D Q P F S L A L S L D A A A A E - - - - - - - A S G S G K H - A D G G K D R
 
AT4G02590.1     R C S S M - - - - K P V F H G Q P M Q Q P P P S A P H Q P T S I - - - - - - - - - - - - - - - - - - - - R P R V R A R R
Sb020044_Sorbi1    E A V Q L P G L F P P V F S G G - - V Q P P H L R P N P P T Q V F R A Q Q P K Q G G A G V G P Q P P A P R P K V R A R R
 
AT4G02590.1     G Q A T D P H S I A E R L R R E R I A E R I R A L Q E L V P T V N K T D R A A M I D E I V D Y V K F L R L Q V K V L S M
Sb020044_Sorbi1    G Q A T D P H S I A E R L R R E R I A E R M R A L Q E L V P N T N K T D R A V M L D E I L D Y V K F L R L Q V K V L S M
 
AT4G02590.1     S R L G G A G A V A P L V T D M P L S S S V E D E T G E G G R T P Q P A W E K W S N D G T E R Q V A K L M E E N V G A A
Sb020044_Sorbi1    S R L G G A G A V A Q L V A D I P L - - S V K G E A S D S G - S K Q Q I W E K W S T D G T E R Q V A K L M E E D I G A A
 
AT4G02590.1     M Q L L Q S K A L C M M P I S L A M A I Y H S Q P P D T S S V V K P E N N P P Q
Sb020044_Sorbi1    M Q F L Q S K A L C M M P I S L A M A I Y D T Q H S Q D G Q P V K P E P N T P S
 
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