fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G02590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020044 not found in 567aa AT4G02590.3 1st_not 0.424124513 II
Sb022740 not found in 378aa AT4G02590.2 not_not 0.422178988 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G02590.1     ---------------------------------------MASNNPHDNLSDQTPSDDFFE
Sb022740_Sorbi1 TSPSPAEQSRPTACREPPEASGPDAWAPTAPAPAPASPGMAGQPPPPG----GSEDDFLE
Sb020044_Sorbi1 ---------------------------------APRCQDMAGQPPPQ-----GPEDDFFD
                                                       **.: *        ..***::

AT4G02590.1     QILGLPNFSASSAAGLSGVDGGLGGGAPPMMLQLGSGEEGSHMGGLGGSGPTGFHNQMFP
Sb022740_Sorbi1 HFFAFPS-AASAAAGGH---AGAGAG---------------------GDHP-------FP
Sb020044_Sorbi1 QFF-------SMAAGGSY-PATAGGGRAP------------------GDQP-------FS
                :::       * ***     .  *.*                     *. *       *.

AT4G02590.1     LGLSLDQG--KGPGFLRPEGGHGSGKRFSDDVVDNRCSSMKPVFH-GQPMQQP-----PP
Sb022740_Sorbi1 LALSLDAA--------------AEPKPDRDPV--QLAGLFPPVFAGAGGVQQPHLRGPPP
Sb020044_Sorbi1 LALSLDAAAAEASG----SGKHADGGKDREAV--QLPGLFPPVF--SGGVQPPHLRPNPP
                *.**** .              ..     : *  :  . : ***  .  :* *     **

AT4G02590.1     S------APH--------QPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV
Sb022740_Sorbi1 PQMFQA-QPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELV
Sb020044_Sorbi1 TQVFRAQQPKQGGAGVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELV
                .       *:        **.: **:**************************:*******

AT4G02590.1     PTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVEDETGEG
Sb022740_Sorbi1 PNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPL--SVKGEASDS
Sb020044_Sorbi1 PNTNKTDRAVMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPL--SVKGEASDS
                *..******.*:***:************************* **:*:**  **:.*:.:.

AT4G02590.1     GRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIY---HSQPP
Sb022740_Sorbi1 GST-QHIWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYDTQHSQ--
Sb020044_Sorbi1 GSK-QQIWEKWSTDGTERQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYDTQHSQ--
                * . *  *****.****:********::*****:******************   ***  

AT4G02590.1     DTSSVVKPENNPPQ
Sb022740_Sorbi1 DGHSLMKPEPNTSS
Sb020044_Sorbi1 DGQPV-KPEPNTPS
                *  .: *** *...
BoxShade v3.31 C (beta, 970507) Output
AT4G02590.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S N N P H D N L S D Q T P S D D F F E
Sb022740_Sorbi1    T S P S P A E Q S R P T A C R E P P E A S G P D A W A P T A P A P A P A S P G M A G Q P P P P G - - - - G S E D D F L E
Sb020044_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A P R C Q D M A G Q P P P Q - - - - - G P E D D F F D
 
AT4G02590.1     Q I L G L P N F S A S S A A G L S G V D G G L G G G A P P M M L Q L G S G E E G S H M G G L G G S G P T G F H N Q M F P
Sb022740_Sorbi1    H F F A F P S - A A S A A A G G H - - - A G A G A G - - - - - - - - - - - - - - - - - - - - - G D H P - - - - - - - F P
Sb020044_Sorbi1    Q F F - - - - - - - S M A A G G S Y - P A T A G G G R A P - - - - - - - - - - - - - - - - - - G D Q P - - - - - - - F S
 
AT4G02590.1     L G L S L D Q G - - K G P G F L R P E G G H G S G K R F S D D V V D N R C S S M K P V F H - G Q P M Q Q P - - - - - P P
Sb022740_Sorbi1    L A L S L D A A - - - - - - - - - - - - - - A E P K P D R D P V - - Q L A G L F P P V F A G A G G V Q Q P H L R G P P P
Sb020044_Sorbi1    L A L S L D A A A A E A S G - - - - S G K H A D G G K D R E A V - - Q L P G L F P P V F - - S G G V Q P P H L R P N P P
 
AT4G02590.1     S - - - - - - A P H - - - - - - - - Q P T S I R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R I R A L Q E L V
Sb022740_Sorbi1    P Q M F Q A - Q P K P G E G G M A P Q P P A P R P K V R A R R G Q A T D P H S I A E R L R R E R I A E R M R A L Q E L V
Sb020044_Sorbi1    T Q V F R A Q Q P K Q G G A G V G P Q P P A P R P K V R A R R G Q A T D P H S I A E R L R R E R I A E R M R A L Q E L V
 
AT4G02590.1     P T V N K T D R A A M I D E I V D Y V K F L R L Q V K V L S M S R L G G A G A V A P L V T D M P L S S S V E D E T G E G
Sb022740_Sorbi1    P N T N K T D R A A M L D E I L D Y V K F L R L Q V K V L S M S R L G G A G A V A Q L V A D I P L - - S V K G E A S D S
Sb020044_Sorbi1    P N T N K T D R A V M L D E I L D Y V K F L R L Q V K V L S M S R L G G A G A V A Q L V A D I P L - - S V K G E A S D S
 
AT4G02590.1     G R T P Q P A W E K W S N D G T E R Q V A K L M E E N V G A A M Q L L Q S K A L C M M P I S L A M A I Y - - - H S Q P P
Sb022740_Sorbi1    G S T - Q H I W E K W S T D G T E K Q V A K L M E E D I G A A M Q F L Q S K A L C M M P I S L A M A I Y D T Q H S Q - -
Sb020044_Sorbi1    G S K - Q Q I W E K W S T D G T E R Q V A K L M E E D I G A A M Q F L Q S K A L C M M P I S L A M A I Y D T Q H S Q - -
 
AT4G02590.1     D T S S V V K P E N N P P Q
Sb022740_Sorbi1    D G H S L M K P E P N T S S
Sb020044_Sorbi1    D G Q P V - K P E P N T P S
 
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