fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G02590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm052263 HAPVYQLGLSLDQGKG in 70/292 AT4G02590.2 1st_not 0.686770428 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G02590.1     MASNNPHDNLSDQTPSDDFFEQILGLPNFSASSAAGLSGVDGGLGGGA--PPMMLQLGSG
gm052263_Glyma1 -MANNPSD-----APADDFLEQILGLPNF-ASADSGLSAADVGLAGAATQAPMMLQLNSA
                  :*** *     :*:***:********* **: :***..* **.*.*  .******.*.

AT4G02590.1     EEGSHMGGLGGSGPTGFHNQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDNRCSS
gm052263_Glyma1 DANAHLAG------AAFHAPVYQLGLSLDQGKG-GFMKPEEASASGKRFRDDVVDNRA--
                : .:*:.*      :.**  :: ********** **::** . .***** *******.  

AT4G02590.1     MKPVFHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL
gm052263_Glyma1 -KNVFHGQPMPTTMPAAPH-PPAIRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL
                 * *******  . *:*** *.:*************************************

AT4G02590.1     VPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVEDETGE
gm052263_Glyma1 VPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPL-SSVEEEGGE
                **:*********:**********************************:** ****:* **

AT4G02590.1     GGRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDT
gm052263_Glyma1 GARN-RPAWDKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPPDT
                *.*. :***:************************:*******:****** ***:******

AT4G02590.1     SSVVKPENNPPQ
gm052263_Glyma1 SSIVKPETNPPS
                **:****.***.
BoxShade v3.31 C (beta, 970507) Output
AT4G02590.1     M A S N N P H D N L S D Q T P S D D F F E Q I L G L P N F S A S S A A G L S G V D G G L G G G A - - P P M M L Q L G S G
gm052263_Glyma1    - M A N N P S D - - - - - A P A D D F L E Q I L G L P N F - A S A D S G L S A A D V G L A G A A T Q A P M M L Q L N S A
 
AT4G02590.1     E E G S H M G G L G G S G P T G F H N Q M F P L G L S L D Q G K G P G F L R P E G G H G S G K R F S D D V V D N R C S S
gm052263_Glyma1    D A N A H L A G - - - - - - A A F H A P V Y Q L G L S L D Q G K G - G F M K P E E A S A S G K R F R D D V V D N R A - -
 
AT4G02590.1     M K P V F H G Q P M Q Q P P P S A P H Q P T S I R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R I R A L Q E L
gm052263_Glyma1    - K N V F H G Q P M P T T M P A A P H - P P A I R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R I R A L Q E L
 
AT4G02590.1     V P T V N K T D R A A M I D E I V D Y V K F L R L Q V K V L S M S R L G G A G A V A P L V T D M P L S S S V E D E T G E
gm052263_Glyma1    V P S V N K T D R A A M L D E I V D Y V K F L R L Q V K V L S M S R L G G A G A V A P L V T D I P L - S S V E E E G G E
 
AT4G02590.1     G G R T P Q P A W E K W S N D G T E R Q V A K L M E E N V G A A M Q L L Q S K A L C M M P I S L A M A I Y H S Q P P D T
gm052263_Glyma1    G A R N - R P A W D K W S N D G T E R Q V A K L M E E N V G A A M Q F L Q S K A L C I M P I S L A S A I Y Q S Q P P D T
 
AT4G02590.1     S S V V K P E N N P P Q
gm052263_Glyma1    S S I V K P E T N P P S
 
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