fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G02670.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001960 not found in 474aa AT1G03840.1 1st_not 0.492753623 II
Pt038999 not found in 472aa AT4G02670.1 not_1st 0.491143317 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G02670.1     MFSSHSLSYKLSSLSTEASASSGNNTLSTIQEFSGFHNVISSVC---THTETHKP--KKK
pt038999_POPTR_ MFPA-AMSNS-TSLSEEASVSSG----TRIQDFGSLNQLASTISPLQQQQQQQQRTIKKK
pt001960_POPTR_ MFPA-AMSNS-TSLSEEASVSSG----TRVQEFGSLNPLASNFSPL-QHQQQQQKIIKKK
                **.: ::* . :*** ***.***    : :*:*..:: : *...    : : ::   ***

AT4G02670.1     RGLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQKNT
pt038999_POPTR_ RNLPGNPDPDAEVIALSPKTLLTTNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNS
pt001960_POPTR_ RSLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNS
                *.********************:**********************************:*:

AT4G02670.1     KEQQKKKVYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWK
pt038999_POPTR_ KE-IKKKAYVCPEPTCVHHHPSRALGDLTGIKKHYCRKHGEKKWKCEKCSKIYAVQSDWK
pt001960_POPTR_ KE-IKKKAYVCPEPTCVHHHPSRALGDLTGIKKHYCRKHGEKKWKCEKCSKIYAVQSDWK
                **  ***.*****..*.*****************:****************:********

AT4G02670.1     AHTKICGTRDYRCDCGTLFSRKDTFITHRAFCDALAEESARLHSTSSSNL-TNPNPN---
pt038999_POPTR_ AHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARL---SAHQLIISQNPNAHA
pt001960_POPTR_ AHSKTCGTREYRCDCGTLFSRKDSFVTHRAFCDALAEESARL---SAHQL-ISTDPNAQA
                **:* ****:*************:*:****************   *: :*  . :**   

AT4G02670.1     ------FQGHH--FMFNK-----SSSLLFTS----------------SPLFIEP------
pt038999_POPTR_ LLLQNPLQTHHPHSLFST---TAHHQISFTSPWDPPHHQNPCSNNPLNPVHIKPETTGHF
pt001960_POPTR_ LLLQNALQA-HPISLFSAPNPTHQQQISLASPWDPPRHHNPSSNNHQNPVHIKPETHNHF
                      :*  *   :*.        .: ::*                .*:.*:*      

AT4G02670.1     --------------------------SLSTAALSTPPTAALSATALLQKATSLSSTTFGG
pt038999_POPTR_ QIPASLLQEPPLTMPSHKGLLAPTFQSLSNAATSQASSHHLSATALLQKAASV------G
pt001960_POPTR_ QIPPLLQEPPPPALPSHKGLLASTFHSLSNAVTSSAASHHLSATALLQKAASV------G
                                          ***.*. * ..:  **********:*:      *

AT4G02670.1     GGQTRSIGHHRHLTNVN--EFLGVDRVMMTSASSSEYDQLVVDGFT------STWQKADR
pt038999_POPTR_ ATQT-SVG-HSHMTQLDMGELGSAGQVHVDSVSH------VSQGPSYNLNSLATWQKSDR
pt001960_POPTR_ AAQT-SVG-HSQMTQLDMGELGSAGQVHVNSASH------VAQGPNYNLNSLATWQKSDR
                . ** *:* * ::*:::  *: ...:* : *.*       * :* .      :****:**

AT4G02670.1     LTRDFLGLTG-----HGGH-------------VSVRPGDMLEYAGGVAFPMSAYDTESHD
pt038999_POPTR_ LTRDFLGLTAPECGDHHGHAASNANGS---VNVSMNVREILTYTGGVGFHQQQYN--ERD
pt001960_POPTR_ LTRDFLGLTG-ECEDHHGHAASNSNGSSGGVNASMNVREILTYTGGVGFHQQQYN--ERD
                *********.     * **             .*:.  ::* *:***.*  . *:  .:*

AT4G02670.1     HSFQKAYDHLGFSGAHRM------
pt038999_POPTR_ HSLLKPHGGFGFAQPSASEAWGDC
pt001960_POPTR_ HSLLKPHGGFGFAQPSASKTWGDC
                **: *.:. :**: .
BoxShade v3.31 C (beta, 970507) Output
AT4G02670.1     M F S S H S L S Y K L S S L S T E A S A S S G N N T L S T I Q E F S G F H N V I S S V C - - - T H T E T H K P - - K K K
pt038999_POPTR_    M F P A - A M S N S - T S L S E E A S V S S G - - - - T R I Q D F G S L N Q L A S T I S P L Q Q Q Q Q Q Q Q R T I K K K
pt001960_POPTR_    M F P A - A M S N S - T S L S E E A S V S S G - - - - T R V Q E F G S L N P L A S N F S P L - Q H Q Q Q Q Q K I I K K K
 
AT4G02670.1     R G L P G N P D P D A E V I A L S P K T L L A T N R F V C E I C N K G F Q R D Q N L Q L H R R G H N L P W K L K Q K N T
pt038999_POPTR_    R N L P G N P D P D A E V I A L S P K T L L T T N R F V C E I C N K G F Q R D Q N L Q L H R R G H N L P W K L K Q R N S
pt001960_POPTR_    R S L P G N P D P D A E V I A L S P K T L L A T N R F V C E I C N K G F Q R D Q N L Q L H R R G H N L P W K L K Q R N S
 
AT4G02670.1     K E Q Q K K K V Y V C P E T N C A H H H P S R A L G D L T G I K K H F C R K H G E K K W K C E K C S K F Y A V Q S D W K
pt038999_POPTR_    K E - I K K K A Y V C P E P T C V H H H P S R A L G D L T G I K K H Y C R K H G E K K W K C E K C S K I Y A V Q S D W K
pt001960_POPTR_    K E - I K K K A Y V C P E P T C V H H H P S R A L G D L T G I K K H Y C R K H G E K K W K C E K C S K I Y A V Q S D W K
 
AT4G02670.1     A H T K I C G T R D Y R C D C G T L F S R K D T F I T H R A F C D A L A E E S A R L H S T S S S N L - T N P N P N - - -
pt038999_POPTR_    A H S K T C G T R E Y R C D C G T L F S R K D S F I T H R A F C D A L A E E S A R L - - - S A H Q L I I S Q N P N A H A
pt001960_POPTR_    A H S K T C G T R E Y R C D C G T L F S R K D S F V T H R A F C D A L A E E S A R L - - - S A H Q L - I S T D P N A Q A
 
AT4G02670.1     - - - - - - F Q G H H - - F M F N K - - - - - S S S L L F T S - - - - - - - - - - - - - - - - S P L F I E P - - - - - -
pt038999_POPTR_    L L L Q N P L Q T H H P H S L F S T - - - T A H H Q I S F T S P W D P P H H Q N P C S N N P L N P V H I K P E T T G H F
pt001960_POPTR_    L L L Q N A L Q A - H P I S L F S A P N P T H Q Q Q I S L A S P W D P P R H H N P S S N N H Q N P V H I K P E T H N H F
 
AT4G02670.1     - - - - - - - - - - - - - - - - - - - - - - - - - - S L S T A A L S T P P T A A L S A T A L L Q K A T S L S S T T F G G
pt038999_POPTR_    Q I P A S L L Q E P P L T M P S H K G L L A P T F Q S L S N A A T S Q A S S H H L S A T A L L Q K A A S V - - - - - - G
pt001960_POPTR_    Q I P P L L Q E P P P P A L P S H K G L L A S T F H S L S N A V T S S A A S H H L S A T A L L Q K A A S V - - - - - - G
 
AT4G02670.1     G G Q T R S I G H H R H L T N V N - - E F L G V D R V M M T S A S S S E Y D Q L V V D G F T - - - - - - S T W Q K A D R
pt038999_POPTR_    A T Q T - S V G - H S H M T Q L D M G E L G S A G Q V H V D S V S H - - - - - - V S Q G P S Y N L N S L A T W Q K S D R
pt001960_POPTR_    A A Q T - S V G - H S Q M T Q L D M G E L G S A G Q V H V N S A S H - - - - - - V A Q G P N Y N L N S L A T W Q K S D R
 
AT4G02670.1     L T R D F L G L T G - - - - - H G G H - - - - - - - - - - - - - V S V R P G D M L E Y A G G V A F P M S A Y D T E S H D
pt038999_POPTR_    L T R D F L G L T A P E C G D H H G H A A S N A N G S - - - V N V S M N V R E I L T Y T G G V G F H Q Q Q Y N - - E R D
pt001960_POPTR_    L T R D F L G L T G - E C E D H H G H A A S N S N G S S G G V N A S M N V R E I L T Y T G G V G F H Q Q Q Y N - - E R D
 
AT4G02670.1     H S F Q K A Y D H L G F S G A H R M - - - - - -
pt038999_POPTR_    H S L L K P H G G F G F A Q P S A S E A W G D C
pt001960_POPTR_    H S L L K P H G G F G F A Q P S A S K T W G D C
 
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