fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G03170.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009742 not found in 186aa AT4G03170.1 1st_1st 0.187082405 Ib
Pt030156 not found in 279aa AT4G03170.1 1st_1st 0.231625835 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G03170.1     MANSTGKPTSSTQEDEEATSATEILAQLMQDIIDREEDIDDEDDIDDEVIDDEDY-----
gm009742_Glyma0 ----------MTQE-------------------------------------KDLY-----
pt030156_POPTR_ ----------MEKED----------TKLMK----------------LEKMDKDDYPEELR
                            :*                                     .: *     

AT4G03170.1     EVASLPLL-------------------------------QESQANQKQSR----------
gm009742_Glyma0 --------------------------KWHGNLFGG----QNC------------------
pt030156_POPTR_ EQGAAALLLSCLLHTRLSCKTALALDKVKSNILGGGKRNQNSHSSRRRPRVSPTQNPGAA
                                                       *:.                  

AT4G03170.1     -------EREEETEKNQPKRFKKQNMMKINIHDFSEETLRLIEVWYEAELDPQDIFGDNE
gm009742_Glyma0 --------KQPQGSSSSSIP----TME-EDIDKAAEALVSLVTSYQEGKHNLPPHENLRD
pt030156_POPTR_ VRRNHFDDQQGEGNSNAAAR----NLPGEPPIRSLEVALRLIENYD--PHEVPSIPGLNG
                        :: : ... .      .:         *  : *:  :     :     . . 

AT4G03170.1     VTRLFSRPIKKQLMSSDVDKDQCMLMLSKEQVKEKMLPFLEDSENPVKGIDVSVYGPDGK
gm009742_Glyma0 YILEYGEPLKKVLTNTDVNVNQNRIFLKKEHVEKSFLPLLRNDENIEEGIRVCAYDMHDN
pt030156_POPTR_ IIGRCSKPFEKQLTESDLRDDQSRLSINKADAQKYLYPLLNEDENLAEGINVTTYDPNGK
                     ..*::* * .:*:  :*  : :.* ..:: : *:*.:.**  :** * .*. ..:

AT4G03170.1     VQQMEFKMWNGDKTPVLTSGWKQFVEDYGLSMTCDFVTVWMFRHIKTRKLCFAIHYVKFS
gm009742_Glyma0 SYTLMFKKWT-KKFYVLNGEWKKFFQIHELQKN-DVVTVWIFRHSKSNKVCFALAYQK--
pt030156_POPTR_ EFEMVFKIWV-SKIHVLIGGWKAFFHEHQLRKDQDFVTLWMFRRLDTEKLCFVINWRRLP
                   : ** *  .*  ** . ** *.. : *    *.**:*:**: .:.*:**.: : :  

AT4G03170.1     -----LRD--------------
gm009742_Glyma0 -----IER--------------
pt030156_POPTR_ GVTTPIKRKRVRMNKSMDQLTC
                     :.
BoxShade v3.31 C (beta, 970507) Output
AT4G03170.1     M A N S T G K P T S S T Q E D E E A T S A T E I L A Q L M Q D I I D R E E D I D D E D D I D D E V I D D E D Y - - - - -
gm009742_Glyma0    - - - - - - - - - - M T Q E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K D L Y - - - - -
pt030156_POPTR_    - - - - - - - - - - M E K E D - - - - - - - - - - T K L M K - - - - - - - - - - - - - - - - L E K M D K D D Y P E E L R
 
AT4G03170.1     E V A S L P L L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Q E S Q A N Q K Q S R - - - - - - - - - -
gm009742_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - K W H G N L F G G - - - - Q N C - - - - - - - - - - - - - - - - - -
pt030156_POPTR_    E Q G A A A L L L S C L L H T R L S C K T A L A L D K V K S N I L G G G K R N Q N S H S S R R R P R V S P T Q N P G A A
 
AT4G03170.1     - - - - - - - E R E E E T E K N Q P K R F K K Q N M M K I N I H D F S E E T L R L I E V W Y E A E L D P Q D I F G D N E
gm009742_Glyma0    - - - - - - - - K Q P Q G S S S S S I P - - - - T M E - E D I D K A A E A L V S L V T S Y Q E G K H N L P P H E N L R D
pt030156_POPTR_    V R R N H F D D Q Q G E G N S N A A A R - - - - N L P G E P P I R S L E V A L R L I E N Y D - - P H E V P S I P G L N G
 
AT4G03170.1     V T R L F S R P I K K Q L M S S D V D K D Q C M L M L S K E Q V K E K M L P F L E D S E N P V K G I D V S V Y G P D G K
gm009742_Glyma0    Y I L E Y G E P L K K V L T N T D V N V N Q N R I F L K K E H V E K S F L P L L R N D E N I E E G I R V C A Y D M H D N
pt030156_POPTR_    I I G R C S K P F E K Q L T E S D L R D D Q S R L S I N K A D A Q K Y L Y P L L N E D E N L A E G I N V T T Y D P N G K
 
AT4G03170.1     V Q Q M E F K M W N G D K T P V L T S G W K Q F V E D Y G L S M T C D F V T V W M F R H I K T R K L C F A I H Y V K F S
gm009742_Glyma0    S Y T L M F K K W T - K K F Y V L N G E W K K F F Q I H E L Q K N - D V V T V W I F R H S K S N K V C F A L A Y Q K - -
pt030156_POPTR_    E F E M V F K I W V - S K I H V L I G G W K A F F H E H Q L R K D Q D F V T L W M F R R L D T E K L C F V I N W R R L P
 
AT4G03170.1     - - - - - L R D - - - - - - - - - - - - - -
gm009742_Glyma0    - - - - - I E R - - - - - - - - - - - - - -
pt030156_POPTR_    G V T T P I K R K R V R M N K S M D Q L T C
 
0