fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G03170.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030156 not found in 279aa AT4G03170.1 1st_1st 0.231625835 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G03170.1     MANSTGKPTSSTQEDEEATSATEILAQLMQDIIDREEDIDDEDDIDDEVIDDEDYEVASL
pt030156_POPTR_ ----------MEKEDTKLMKLEKM----------------DKDDYPEEL---REQGAAAL
                            :** :  .  ::                *:**  :*:   .:  .*:*

AT4G03170.1     PL---------------LQESQAN--QKQSREREEETEKNQPKRFKKQN---MMKINIHD
pt030156_POPTR_ LLSCLLHTRLSCKTALALDKVKSNILGGGKRNQNSHSSRRRPRVSPTQNPGAAVRRNHFD
                 *               *:: ::*     .*:::..:.:.:*:   .**    :: * .*

AT4G03170.1     FS----------------------EETLRLIEVWYEAELDPQD---IFGDNEVTRLFSRP
pt030156_POPTR_ DQQGEGNSNAAARNLPGEPPIRSLEVALRLIENY-----DPHEVPSIPGLNGIIGRCSKP
                 .                      * :***** :     **::   * * * :    *:*

AT4G03170.1     IKKQLMSSDVDKDQCMLMLSKEQVKEKMLPFLEDSENPVKGIDVSVYGPDGKVQQMEFKM
pt030156_POPTR_ FEKQLTESDLRDDQSRLSINKADAQKYLYPLLNEDENLAEGINVTTYDPNGKEFEMVFKI
                ::*** .**: .**. * :.* :.:: : *:*::.** .:**:*:.*.*:**  :* **:

AT4G03170.1     WNGDKTPVLTSGWKQFVEDYGLSMTCDFVTVWMFRHIKTRKLCFAIHYVKF---------
pt030156_POPTR_ WV-SKIHVLIGGWKAFFHEHQLRKDQDFVTLWMFRRLDTEKLCFVINWRRLPGVTTPIKR
                *  .*  ** .*** *..:: *    ****:****::.*.****.*:: ::         

AT4G03170.1     -------SLRD---
pt030156_POPTR_ KRVRMNKSMDQLTC
                       *: :
BoxShade v3.31 C (beta, 970507) Output
AT4G03170.1     M A N S T G K P T S S T Q E D E E A T S A T E I L A Q L M Q D I I D R E E D I D D E D D I D D E V I D D E D Y E V A S L
pt030156_POPTR_    - - - - - - - - - - M E K E D T K L M K L E K M - - - - - - - - - - - - - - - - D K D D Y P E E L - - - R E Q G A A A L
 
AT4G03170.1     P L - - - - - - - - - - - - - - - L Q E S Q A N - - Q K Q S R E R E E E T E K N Q P K R F K K Q N - - - M M K I N I H D
pt030156_POPTR_    L L S C L L H T R L S C K T A L A L D K V K S N I L G G G K R N Q N S H S S R R R P R V S P T Q N P G A A V R R N H F D
 
AT4G03170.1     F S - - - - - - - - - - - - - - - - - - - - - - E E T L R L I E V W Y E A E L D P Q D - - - I F G D N E V T R L F S R P
pt030156_POPTR_    D Q Q G E G N S N A A A R N L P G E P P I R S L E V A L R L I E N Y - - - - - D P H E V P S I P G L N G I I G R C S K P
 
AT4G03170.1     I K K Q L M S S D V D K D Q C M L M L S K E Q V K E K M L P F L E D S E N P V K G I D V S V Y G P D G K V Q Q M E F K M
pt030156_POPTR_    F E K Q L T E S D L R D D Q S R L S I N K A D A Q K Y L Y P L L N E D E N L A E G I N V T T Y D P N G K E F E M V F K I
 
AT4G03170.1     W N G D K T P V L T S G W K Q F V E D Y G L S M T C D F V T V W M F R H I K T R K L C F A I H Y V K F - - - - - - - - -
pt030156_POPTR_    W V - S K I H V L I G G W K A F F H E H Q L R K D Q D F V T L W M F R R L D T E K L C F V I N W R R L P G V T T P I K R
 
AT4G03170.1     - - - - - - - S L R D - - -
pt030156_POPTR_    K R V R M N K S M D Q L T C
 
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