fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G03170.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009742 not found in 186aa AT4G03170.1 1st_1st 0.187082405 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G03170.1     MANSTGKPTSSTQEDE-----------------EATSATEILAQLMQDIIDREEDIDDED
gm009742_Glyma0 ----------MTQEKDLYKWHGNLFGGQNCKQPQGSSSSSIPTM--------EEDIDKAA
                           ***.:                 :.:*::.* :         *****.  

AT4G03170.1     DIDDEVIDDEDYEVASLPLLQESQANQKQSREREEETEKNQPKRFKKQNMMKINIHDFSE
gm009742_Glyma0 E-------------ALVSLVTSYQ-----------EGKHNLPPH--------ENLRDYIL
                :             * :.*: . *           * ::* * :         *::*:  

AT4G03170.1     ETLRLIEVWYEAELDPQDIFGDNEVTRLFSRPIKKQLMSSDVDKDQCMLMLSKEQVKEKM
gm009742_Glyma0 E---------------------------YGEPLKKVLTNTDVNVNQNRIFLKKEHVEKSF
                *                           :..*:** * .:**: :*  ::*.**:*::.:

AT4G03170.1     LPFLEDSENPVKGIDVSVYGPDGKVQQMEFKMWNGDKTPVLTSGWKQFVEDYGLSMTCDF
gm009742_Glyma0 LPLLRNDENIEEGIRVCAYDMHDNSYTLMFKKWT-KKFYVLNGEWKKFFQIHELQKN-DV
                **:*.:.**  :** *..*. ..:   : ** *. .*  **.. **:*.: : *. . *.

AT4G03170.1     VTVWMFRHIKTRKLCFAIHYVKFSLRD
gm009742_Glyma0 VTVWIFRHSKSNKVCFALAYQKIER--
                ****:*** *:.*:***: * *:.
BoxShade v3.31 C (beta, 970507) Output
AT4G03170.1     M A N S T G K P T S S T Q E D E - - - - - - - - - - - - - - - - - E A T S A T E I L A Q L M Q D I I D R E E D I D D E D
gm009742_Glyma0    - - - - - - - - - - M T Q E K D L Y K W H G N L F G G Q N C K Q P Q G S S S S S I P T M - - - - - - - - E E D I D K A A
 
AT4G03170.1     D I D D E V I D D E D Y E V A S L P L L Q E S Q A N Q K Q S R E R E E E T E K N Q P K R F K K Q N M M K I N I H D F S E
gm009742_Glyma0    E - - - - - - - - - - - - - A L V S L V T S Y Q - - - - - - - - - - - E G K H N L P P H - - - - - - - - E N L R D Y I L
 
AT4G03170.1     E T L R L I E V W Y E A E L D P Q D I F G D N E V T R L F S R P I K K Q L M S S D V D K D Q C M L M L S K E Q V K E K M
gm009742_Glyma0    E - - - - - - - - - - - - - - - - - - - - - - - - - - - Y G E P L K K V L T N T D V N V N Q N R I F L K K E H V E K S F
 
AT4G03170.1     L P F L E D S E N P V K G I D V S V Y G P D G K V Q Q M E F K M W N G D K T P V L T S G W K Q F V E D Y G L S M T C D F
gm009742_Glyma0    L P L L R N D E N I E E G I R V C A Y D M H D N S Y T L M F K K W T - K K F Y V L N G E W K K F F Q I H E L Q K N - D V
 
AT4G03170.1     V T V W M F R H I K T R K L C F A I H Y V K F S L R D
gm009742_Glyma0    V T V W I F R H S K S N K V C F A L A Y Q K I E R - -
 
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