fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G05100.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os028572 not found in 368aa AT4G05100.1 1st_1st 0.527888446 Ia
Sb023923 not found in 508aa AT4G05100.1 1st_1st 0.531872509 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G05100.1     MGRSPCCEKKNGLKKGPWTPEEDQKLIDYINIHGYGNWRTLPKNAGLQRCGKSCRLRWTN
Os028572_Os07t0 MGRAPCCE-KSGLKKGPWTPEEDEKLIAYIKEHGQGNWRTLPKNAGLSRCGKSCRLRWTN
Sb023923_Sorbi1 MGRAPCCE-KSGMKKGPWTPEEDEKLIAYIKKHGQGNWRTLPKNAGLARCGKSCRLRWTN
                ***:**** *.*:**********:*** **: ** ************ ************

AT4G05100.1     YLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLKM
Os028572_Os07t0 YLRPDIKRGRFSFEEEEAIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRM
Sb023923_Sorbi1 YLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRM
                *****************:*******:********************************:*

AT4G05100.1     GIDPVTHTPRLDLLDISSIL---SSSIYNSSHHHHHHHQQHMNMSRLMMSDGNHQPLVN-
Os028572_Os07t0 GIDPVTHAPRLDLLDLTSLLKPAAAAAYYPT-------QADLDTLRAL------EPLAGY
Sb023923_Sorbi1 GIDPVTHAPRLDLLDLSALLKP-AAAAYYPT-------QADLDTLRAL------EPLANY
                *******:*******::::*   ::: * .:       * .::  * :      :**.. 

AT4G05100.1     PEILKLATSLF-----------------------------SNQ-----------------
Os028572_Os07t0 PDLLRLASAILPAATTTGAAAAAAAEQAQLLLPWLLQAQMAQQ-----QQQVTPPPPPPP
Sb023923_Sorbi1 PDLLRLASTLL----SSGPPAIGDHHQNGQLLPWILQAQMAQQAAAAMAQQVA----PPP
                *::*:**::::                             ::*                 

AT4G05100.1     -----------------NHPNNTH--ENNT-VNQTEVNQYQT-----------GYNMPGN
Os028572_Os07t0 QAAATEQFLQATSTACHQMPGLVH--ASPT---QQLAQQPQDHMAAATCHRRGAVQHPSY
Sb023923_Sorbi1 QQQA-EQFMQA-GAAC-QMPDLVHMNSNPTTVQQQLAAAHQD-MAAAACHSMQPPNNTGY
                                 : *. .*   . *   *  .   *              : .. 

AT4G05100.1     E-ELQSWFPIMDQF---TNFQDLMPMKTTVQNSLSYDDDCSKSNFVLEPYYSDFASVLTT
Os028572_Os07t0 D-NQLDYVPALMQM--ASDASNLQQWSSTVSSS---------NN-------HNVNSGVST
Sb023923_Sorbi1 EVDSLD-VPALMQMVQAADASNLQQWSSTVTSSSNNNN---NNN-------NNVGSGVST
                : :  . .* : *:   :: .:*   .:** .*         .*        :. * ::*

AT4G05100.1     PSSSPTP---LNSSSS----TYINSSTCSTEDEKESYYSDNIT-NYSFDVNGFLQFQ
Os028572_Os07t0 PSSSPAAAGQINSSSTTTTTTYG---LNASGDVDDAGLLINMHLSELLDVSDYM---
Sb023923_Sorbi1 PSSSPVA--RLNHSTSTTTTTYGGASASTSNDAAAAAALFNMQLSELLDVSDYM---
                *****..   :* *::    **      :: *   :    *:  .  :**..::
BoxShade v3.31 C (beta, 970507) Output
AT4G05100.1     M G R S P C C E K K N G L K K G P W T P E E D Q K L I D Y I N I H G Y G N W R T L P K N A G L Q R C G K S C R L R W T N
Os028572_Os07t0    M G R A P C C E - K S G L K K G P W T P E E D E K L I A Y I K E H G Q G N W R T L P K N A G L S R C G K S C R L R W T N
Sb023923_Sorbi1    M G R A P C C E - K S G M K K G P W T P E E D E K L I A Y I K K H G Q G N W R T L P K N A G L A R C G K S C R L R W T N
 
AT4G05100.1     Y L R P D I K R G R F S F E E E E T I I Q L H S I M G N K W S A I A A R L P G R T D N E I K N Y W N T H I R K R L L K M
Os028572_Os07t0    Y L R P D I K R G R F S F E E E E A I I Q L H S I L G N K W S A I A A R L P G R T D N E I K N Y W N T H I R K R L L R M
Sb023923_Sorbi1    Y L R P D I K R G R F S F E E E E T I I Q L H S I L G N K W S A I A A R L P G R T D N E I K N Y W N T H I R K R L L R M
 
AT4G05100.1     G I D P V T H T P R L D L L D I S S I L - - - S S S I Y N S S H H H H H H H Q Q H M N M S R L M M S D G N H Q P L V N -
Os028572_Os07t0    G I D P V T H A P R L D L L D L T S L L K P A A A A A Y Y P T - - - - - - - Q A D L D T L R A L - - - - - - E P L A G Y
Sb023923_Sorbi1    G I D P V T H A P R L D L L D L S A L L K P - A A A A Y Y P T - - - - - - - Q A D L D T L R A L - - - - - - E P L A N Y
 
AT4G05100.1     P E I L K L A T S L F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S N Q - - - - - - - - - - - - - - - - -
Os028572_Os07t0    P D L L R L A S A I L P A A T T T G A A A A A A A E Q A Q L L L P W L L Q A Q M A Q Q - - - - - Q Q Q V T P P P P P P P
Sb023923_Sorbi1    P D L L R L A S T L L - - - - S S G P P A I G D H H Q N G Q L L P W I L Q A Q M A Q Q A A A A M A Q Q V A - - - - P P P
 
AT4G05100.1     - - - - - - - - - - - - - - - - - N H P N N T H - - E N N T - V N Q T E V N Q Y Q T - - - - - - - - - - - G Y N M P G N
Os028572_Os07t0    Q A A A T E Q F L Q A T S T A C H Q M P G L V H - - A S P T - - - Q Q L A Q Q P Q D H M A A A T C H R R G A V Q H P S Y
Sb023923_Sorbi1    Q Q Q A - E Q F M Q A - G A A C - Q M P D L V H M N S N P T T V Q Q Q L A A A H Q D - M A A A A C H S M Q P P N N T G Y
 
AT4G05100.1     E - E L Q S W F P I M D Q F - - - T N F Q D L M P M K T T V Q N S L S Y D D D C S K S N F V L E P Y Y S D F A S V L T T
Os028572_Os07t0    D - N Q L D Y V P A L M Q M - - A S D A S N L Q Q W S S T V S S S - - - - - - - - - N N - - - - - - - H N V N S G V S T
Sb023923_Sorbi1    E V D S L D - V P A L M Q M V Q A A D A S N L Q Q W S S T V T S S S N N N N - - - N N N - - - - - - - N N V G S G V S T
 
AT4G05100.1     P S S S P T P - - - L N S S S S - - - - T Y I N S S T C S T E D E K E S Y Y S D N I T - N Y S F D V N G F L Q F Q
Os028572_Os07t0    P S S S P A A A G Q I N S S S T T T T T T Y G - - - L N A S G D V D D A G L L I N M H L S E L L D V S D Y M - - -
Sb023923_Sorbi1    P S S S P V A - - R L N H S T S T T T T T Y G G A S A S T S N D A A A A A A L F N M Q L S E L L D V S D Y M - - -
 
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