fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G05100.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp002778 not found in 471aa AT5G15310.1 1st_not 0.466135458 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G05100.1     MGRSPCCEKKNGLKKGPWTPEEDQKLIDYINIHGYGNWRTLPKNAGLQRCGKSCRLRWTN
pp002778_Pp1s31 MGRTPCCDKM-GLKKGPWTPDEDQKLVTYIQRNGHGSWRALPKHAGLLRCGKSCRLRWTN
                ***:***:*  *********:*****: **: :*:*.**:***:*** ************

AT4G05100.1     YLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLKM
pp002778_Pp1s31 YLRPDIKRGRFSFEEEQVIIHLHGILGNRWSAIAAHLPGRTDNEIKNYWNTHLRKRLLQM
                ****************:.**:**.*:**:******:****************:*****:*

AT4G05100.1     GIDPVTHTPRLDL----LDISSILSSSIYNSSHHHHHHHQQHMNMSRLMMSD--------
pp002778_Pp1s31 GIDPVTHKVRSNLLIENLDLKPMVSSTL----SHMSQWDRVRMEMEARLSSDYFAKSSAH
                *******. * :*    **:..::**::     *  : .: :*:*.  : **        

AT4G05100.1     --------GNHQPLVN------------------------------PEILKLAT------
pp002778_Pp1s31 GAAIFEASGTSASFIKAPSDCSMRSWKTQVSESLLRRDFGVLEKLPPCSMDLQTVLQDWE
                        *.  .:::                              *  :.* *      

AT4G05100.1     ----------SLFSNQ--------NHP--NNTHENNTVNQTEVNQ-----------YQTG
pp002778_Pp1s31 DSLHCQPMEPGLYDSQMRAKTHSGSHSGYSQTPRNDNCSGTTVTDLAARFETFPSFHQTS
                          .*:..*        .*.  .:* .*:. . * *.:           :**.

AT4G05100.1     YNMPGNEELQSWFPIMDQFTN-----FQDL---------MPMKTTVQNSLSYDDDCSKSN
pp002778_Pp1s31 ---PSPSPLPQTSQISDSFTSSGTKLFPDLPKPNSLPSMIPEHFSPTSTLSSPFGTSPSD
                   *. . * .   * *.**.     * **         :* : :  .:**   . * *:

AT4G05100.1     FVLEPYYSDFASVLTTPSSSPTPLNSSSSTYINSSTCST------------------EDE
pp002778_Pp1s31 FMVPPPSSNCEIAFST---SP-PLQLPSPTFWTSLSAPTTMGAGDLQLPSEIPELLMELH
                *:: *  *:   .::*   ** **: .*.*: .* :..*                  * .

AT4G05100.1     KESYYSD----NITNYSFDVNGFLQFQ---------------------------------
pp002778_Pp1s31 AEPAVPDLIVATVPTTTAGTPGWTSQQGLIESKDYWANMLHLVGPPASQQLSTLLSTPAR
                 *.  .*    .:.. : .. *: . *                                 

AT4G05100.1     ---
pp002778_Pp1s31 LTR
BoxShade v3.31 C (beta, 970507) Output
AT4G05100.1     M G R S P C C E K K N G L K K G P W T P E E D Q K L I D Y I N I H G Y G N W R T L P K N A G L Q R C G K S C R L R W T N
pp002778_Pp1s31    M G R T P C C D K M - G L K K G P W T P D E D Q K L V T Y I Q R N G H G S W R A L P K H A G L L R C G K S C R L R W T N
 
AT4G05100.1     Y L R P D I K R G R F S F E E E E T I I Q L H S I M G N K W S A I A A R L P G R T D N E I K N Y W N T H I R K R L L K M
pp002778_Pp1s31    Y L R P D I K R G R F S F E E E Q V I I H L H G I L G N R W S A I A A H L P G R T D N E I K N Y W N T H L R K R L L Q M
 
AT4G05100.1     G I D P V T H T P R L D L - - - - L D I S S I L S S S I Y N S S H H H H H H H Q Q H M N M S R L M M S D - - - - - - - -
pp002778_Pp1s31    G I D P V T H K V R S N L L I E N L D L K P M V S S T L - - - - S H M S Q W D R V R M E M E A R L S S D Y F A K S S A H
 
AT4G05100.1     - - - - - - - - G N H Q P L V N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P E I L K L A T - - - - - -
pp002778_Pp1s31    G A A I F E A S G T S A S F I K A P S D C S M R S W K T Q V S E S L L R R D F G V L E K L P P C S M D L Q T V L Q D W E
 
AT4G05100.1     - - - - - - - - - - S L F S N Q - - - - - - - - N H P - - N N T H E N N T V N Q T E V N Q - - - - - - - - - - - Y Q T G
pp002778_Pp1s31    D S L H C Q P M E P G L Y D S Q M R A K T H S G S H S G Y S Q T P R N D N C S G T T V T D L A A R F E T F P S F H Q T S
 
AT4G05100.1     Y N M P G N E E L Q S W F P I M D Q F T N - - - - - F Q D L - - - - - - - - - M P M K T T V Q N S L S Y D D D C S K S N
pp002778_Pp1s31    - - - P S P S P L P Q T S Q I S D S F T S S G T K L F P D L P K P N S L P S M I P E H F S P T S T L S S P F G T S P S D
 
AT4G05100.1     F V L E P Y Y S D F A S V L T T P S S S P T P L N S S S S T Y I N S S T C S T - - - - - - - - - - - - - - - - - - E D E
pp002778_Pp1s31    F M V P P P S S N C E I A F S T - - - S P - P L Q L P S P T F W T S L S A P T T M G A G D L Q L P S E I P E L L M E L H
 
AT4G05100.1     K E S Y Y S D - - - - N I T N Y S F D V N G F L Q F Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp002778_Pp1s31    A E P A V P D L I V A T V P T T T A G T P G W T S Q Q G L I E S K D Y W A N M L H L V G P P A S Q Q L S T L L S T P A R
 
AT4G05100.1     - - -
pp002778_Pp1s31    L T R
 
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