fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G05100.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020494 not found in 376aa AT4G21440.1 1st_not 0.565737051 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G05100.1     MGRSPCCEKKNGLKKGPWTPEEDQKLIDYINIHGYGNWRTLPKNAGLQRCGKSCRLRWTN
pt020494_POPTR_ MGRAPCCD-KNGLKKGPWTPEEDQKLVDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTN
                ***:***: *****************:***: ****************************

AT4G05100.1     YLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLKM
pt020494_POPTR_ YLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRM
                *************************:********************************:*

AT4G05100.1     GIDPVTHTPRLDLLDISSILSSSIYNSSHHHHHHHQQHMNMSRLMMSDGNHQPLVNPEIL
pt020494_POPTR_ GIDPVTHSPRLDLLDLSSILSSSLYNSS--------DQMNMSRML----GVPPLVNPGLL
                *******:*******:*******:****        ::*****::    .  ***** :*

AT4G05100.1     KLATSLFSNQNH-------PNNTHENNTVN-QTEVNQYQT-------GYNMPGNE-----
pt020494_POPTR_ RLATSLLSSQRDQTQNFVIQNGQEENHLPNPQVQQSQYESMIHQANIQFQTPGQEMPTCT
                :*****:*.*..        *. .**:  * *.: .**::        :: **:*     

AT4G05100.1     ------------ELQSWFPIMDQF-----TNF-----------------------QDLMP
pt020494_POPTR_ TLTTSPCVTFSNEARIMDPNVDQYQSSTITNFSSPNSQFSTHDQWQNNGMGSNLAEDYYV
                            * :   * :**:     ***                       :*   

AT4G05100.1     MKTTVQNSLSY------DDDCSKSNFVLEPYYSD--FASVLTTPSSSPTPLNSSSSTYIN
pt020494_POPTR_ PAVSSYNSNGYYGSDLMDPSSETSTFISNSSNQNFGFASVLSTPSSSPTPLN-SNSTYIN
                  .:  ** .*      * ....*.*: :.  .:  *****:********** *.*****

AT4G05100.1     SSTCSTEDEKESYYSDNITNYSF-DVNGFLQFQ
pt020494_POPTR_ SS--SAEDERESYCS-NILKFEIPDILDAINFM
                **  *:***:*** * ** ::.: *: . ::*
BoxShade v3.31 C (beta, 970507) Output
AT4G05100.1     M G R S P C C E K K N G L K K G P W T P E E D Q K L I D Y I N I H G Y G N W R T L P K N A G L Q R C G K S C R L R W T N
pt020494_POPTR_    M G R A P C C D - K N G L K K G P W T P E E D Q K L V D Y I Q K H G Y G N W R T L P K N A G L Q R C G K S C R L R W T N
 
AT4G05100.1     Y L R P D I K R G R F S F E E E E T I I Q L H S I M G N K W S A I A A R L P G R T D N E I K N Y W N T H I R K R L L K M
pt020494_POPTR_    Y L R P D I K R G R F S F E E E E T I I Q L H S I L G N K W S A I A A R L P G R T D N E I K N Y W N T H I R K R L L R M
 
AT4G05100.1     G I D P V T H T P R L D L L D I S S I L S S S I Y N S S H H H H H H H Q Q H M N M S R L M M S D G N H Q P L V N P E I L
pt020494_POPTR_    G I D P V T H S P R L D L L D L S S I L S S S L Y N S S - - - - - - - - D Q M N M S R M L - - - - G V P P L V N P G L L
 
AT4G05100.1     K L A T S L F S N Q N H - - - - - - - P N N T H E N N T V N - Q T E V N Q Y Q T - - - - - - - G Y N M P G N E - - - - -
pt020494_POPTR_    R L A T S L L S S Q R D Q T Q N F V I Q N G Q E E N H L P N P Q V Q Q S Q Y E S M I H Q A N I Q F Q T P G Q E M P T C T
 
AT4G05100.1     - - - - - - - - - - - - E L Q S W F P I M D Q F - - - - - T N F - - - - - - - - - - - - - - - - - - - - - - - Q D L M P
pt020494_POPTR_    T L T T S P C V T F S N E A R I M D P N V D Q Y Q S S T I T N F S S P N S Q F S T H D Q W Q N N G M G S N L A E D Y Y V
 
AT4G05100.1     M K T T V Q N S L S Y - - - - - - D D D C S K S N F V L E P Y Y S D - - F A S V L T T P S S S P T P L N S S S S T Y I N
pt020494_POPTR_    P A V S S Y N S N G Y Y G S D L M D P S S E T S T F I S N S S N Q N F G F A S V L S T P S S S P T P L N - S N S T Y I N
 
AT4G05100.1     S S T C S T E D E K E S Y Y S D N I T N Y S F - D V N G F L Q F Q
pt020494_POPTR_    S S - - S A E D E R E S Y C S - N I L K F E I P D I L D A I N F M
 
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