fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G05100.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023923 not found in 508aa AT4G05100.1 1st_1st 0.531872509 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G05100.1     MGRSPCCEKKNGLKKGPWTPEEDQKLIDYINIHGYGNWRTLPKNAGLQRCGKSCRLRWTN
Sb023923_Sorbi1 MGRAPCCE-KSGMKKGPWTPEEDEKLIAYIKKHGQGNWRTLPKNAGLARCGKSCRLRWTN
                ***:**** *.*:**********:*** **: ** ************ ************

AT4G05100.1     YLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLKM
Sb023923_Sorbi1 YLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRM
                *************************:********************************:*

AT4G05100.1     GIDPVTHTPRLDLLDISSIL--SSSIYNSSHHHHHHHQQHMNMSRLMMSDGNHQPLVN-P
Sb023923_Sorbi1 GIDPVTHAPRLDLLDLSALLKPAAAAYYPT-------QADLDTLRAL------EPLANYP
                *******:*******:*::*  ::: * .:       * .::  * :      :**.* *

AT4G05100.1     EILKLATSLFSNQNHPNNTHENNTVNQTEVNQYQTGYNMPGNEELQSWFPIMDQFTNFQ-
Sb023923_Sorbi1 DLLRLASTLLSSGPPAIGDHHQNGQLLPWILQAQMAQQAAAAMAQQVAPPPQQQAEQFMQ
                ::*:**::*:*.   . . *.:*    . : * * . : ..    *   *  :*  :*  

AT4G05100.1     --------DLMPMK---TTVQNSL--SYDDDCSKSNFVLEP-----YYSD----------
Sb023923_Sorbi1 AGAACQMPDLVHMNSNPTTVQQQLAAAHQDMAAAACHSMQPPNNTGYEVDSLDVPALMQM
                        **: *:   ****:.*  :::* .: : . ::*     *  *          

AT4G05100.1     -----------------------------FASVLTTPSSSPTP-LNSSSS----TYINSS
Sb023923_Sorbi1 VQAADASNLQQWSSTVTSSSNNNNNNNNNVGSGVSTPSSSPVARLNHSTSTTTTTYGGAS
                                             ..* ::******.. ** *:*    ** .:*

AT4G05100.1     TCSTEDEKESYYSDNIT-NYSFDVNGFLQFQ
Sb023923_Sorbi1 ASTSNDAAAAAALFNMQLSELLDVSDYM---
                :.:::*   :    *:  .  :**..::
BoxShade v3.31 C (beta, 970507) Output
AT4G05100.1     M G R S P C C E K K N G L K K G P W T P E E D Q K L I D Y I N I H G Y G N W R T L P K N A G L Q R C G K S C R L R W T N
Sb023923_Sorbi1    M G R A P C C E - K S G M K K G P W T P E E D E K L I A Y I K K H G Q G N W R T L P K N A G L A R C G K S C R L R W T N
 
AT4G05100.1     Y L R P D I K R G R F S F E E E E T I I Q L H S I M G N K W S A I A A R L P G R T D N E I K N Y W N T H I R K R L L K M
Sb023923_Sorbi1    Y L R P D I K R G R F S F E E E E T I I Q L H S I L G N K W S A I A A R L P G R T D N E I K N Y W N T H I R K R L L R M
 
AT4G05100.1     G I D P V T H T P R L D L L D I S S I L - - S S S I Y N S S H H H H H H H Q Q H M N M S R L M M S D G N H Q P L V N - P
Sb023923_Sorbi1    G I D P V T H A P R L D L L D L S A L L K P A A A A Y Y P T - - - - - - - Q A D L D T L R A L - - - - - - E P L A N Y P
 
AT4G05100.1     E I L K L A T S L F S N Q N H P N N T H E N N T V N Q T E V N Q Y Q T G Y N M P G N E E L Q S W F P I M D Q F T N F Q -
Sb023923_Sorbi1    D L L R L A S T L L S S G P P A I G D H H Q N G Q L L P W I L Q A Q M A Q Q A A A A M A Q Q V A P P P Q Q Q A E Q F M Q
 
AT4G05100.1     - - - - - - - - D L M P M K - - - T T V Q N S L - - S Y D D D C S K S N F V L E P - - - - - Y Y S D - - - - - - - - - -
Sb023923_Sorbi1    A G A A C Q M P D L V H M N S N P T T V Q Q Q L A A A H Q D M A A A A C H S M Q P P N N T G Y E V D S L D V P A L M Q M
 
AT4G05100.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F A S V L T T P S S S P T P - L N S S S S - - - - T Y I N S S
Sb023923_Sorbi1    V Q A A D A S N L Q Q W S S T V T S S S N N N N N N N N N V G S G V S T P S S S P V A R L N H S T S T T T T T Y G G A S
 
AT4G05100.1     T C S T E D E K E S Y Y S D N I T - N Y S F D V N G F L Q F Q
Sb023923_Sorbi1    A S T S N D A A A A A A L F N M Q L S E L L D V S D Y M - - -
 
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