fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G06634.1 YIHEYKLKLHLKREHP at 245/387 in AT4G06634.1
YIHEYKLKLHLKREHP at 207/349 in AT4G06634.2
YIHEYKLKLHLKREHP at 238/380 in AT4G06634.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp010943 YIHEYKLNLHLRNSHA in 367/517 AT4G06634.1 1st_1st 0.361308677 Ib
Sm016472 YFYEYKLNLHLKRGH in 209/218 AT4G06634.1 1st_1st 0.349928876 Ib
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G06634.1     ---------MDHQN----------YQYQNP---------FERRPILKSKA----------
Sm016472_Selmo1 ------------------------------------------------------------
pp010943_Pp1s42 MFHIEQSSLPDHHSDIAMALAASQQQHHNQILQQQQVHLLQQQHILQQQQIQFLQQQQQL
                                                                            

AT4G06634.1     ------------PAVKWIKEWVPQDIVATGGKCHLHKWVTEDTF---SRLKEKEKEPDVP
Sm016472_Selmo1 ---------------------VPQDTVLSTGKCRLLKWINDDTM---NLMKTKHLDQDA-
pp010943_Pp1s42 QLQQLQPVYFPPPPRKWVKRWVPQDTVLNQGKLSILKWVTEDMVAQFTGMAAAMEEQEA-
                                     **** * . **  : **:.:* .   . :     : :. 

AT4G06634.1     EPEPEPTTEILFLCSYDGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKR
Sm016472_Selmo1 ----DLDYEIVYVCTFENCGKVFTEAPALRKHAHVHGEKQFICHYDGCGKRFVDSSKLKR
pp010943_Pp1s42 ----EEENEILYLCTFEGCGKGFADPGSLRKHAHTHGEKQFICHYDGCGKRFVDSSKLKR
                    :   **:::*:::.*** * :  :****:* ***:*::*. :****:*:*******

AT4G06634.1     HYLIHTGERNYICTYEGCGK--------------------------AFSLDFNLRSHMKT
Sm016472_Selmo1 HFLIHTGEKHFLCKF--CGK--------------------------AFSLDFNLRSHMRT
pp010943_Pp1s42 HFLIHTGEKHFVCPFEGCGKVWMLSSSRRFLACLCHVVNQHSATLQAFSLDFNLRSHMRT
                *:******::::* :  ***                          ************:*

AT4G06634.1     HSQENYHICPYSGCVKRYAHEYKLKNHVAAYHEKNGGG----------ETPKYTPPA---
Sm016472_Selmo1 HTGENYHTCPYEDCGKRYAHEYKLRGHLKTHHDK--------------LLPDGKQVPLTL
pp010943_Pp1s42 HTGENYHACPYEDCGKRYAHEYKLRAHMRNHHDKHFDYTSYSPKYLVQSIPEMTPPPMHM
                *: **** ***..* *********: *:  :*:*                *. .  .   

AT4G06634.1     ------------------------------EKVLRTVKTPATVC----GPSSDRPYACPY
Sm016472_Selmo1 ESDTSK---------------------------TSPAATAAAA-----ATGGGRPFACPY
pp010943_Pp1s42 ERDRERDQELEMSRERDRDMDREREREMEKEREIAPVGRPRSGPPRQDVNASDRPFACRY
                                                   ..  . :        ...**:** *

AT4G06634.1     EGCEKAYIHEYKLKLHLKREHPGHLQEEN---ADTPTLNKHNGNDRNEIDDGSDQDVYRK
Sm016472_Selmo1 KGCDKRYFYEYKLNLHL-------------------------------------------
pp010943_Pp1s42 PGCTKRYIHEYKLNLHLRNSH----ADENPEFGEEP-IGRGDSDGEDDIDDGSMQGTPAR
                 ** * *::****:***                                           

AT4G06634.1     HASNGKGQTHKQQSRAKPNM--RTPPAKVGKKGSTSSPAKA----RIAKKPWQAKETF--
Sm016472_Selmo1 ------------------------------KRGH--------------------------
pp010943_Pp1s42 AAATARG-----SGRGKLKIIPKRDPAKQQRRGHLKAQKEVDLNLRVRTLPSETLPTYWR
                                              ::*                           

AT4G06634.1     -EEVEREEEEDSEETE-EDRDNVED-GWRF----GE-----NNEDDDDDEETEYED
Sm016472_Selmo1 --------------------------------------------------------
pp010943_Pp1s42 GGQVKHTAPDDSEETEDEDAENTEDEGYRYYNGRGEGAMAVDDEDTEDDGDQ----
BoxShade v3.31 C (beta, 970507) Output
AT4G06634.1     - - - - - - - - - M D H Q N - - - - - - - - - - Y Q Y Q N P - - - - - - - - - F E R R P I L K S K A - - - - - - - - - -
Sm016472_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp010943_Pp1s42    M F H I E Q S S L P D H H S D I A M A L A A S Q Q Q H H N Q I L Q Q Q Q V H L L Q Q Q H I L Q Q Q Q I Q F L Q Q Q Q Q L
 
AT4G06634.1     - - - - - - - - - - - - P A V K W I K E W V P Q D I V A T G G K C H L H K W V T E D T F - - - S R L K E K E K E P D V P
Sm016472_Selmo1    - - - - - - - - - - - - - - - - - - - - - V P Q D T V L S T G K C R L L K W I N D D T M - - - N L M K T K H L D Q D A -
pp010943_Pp1s42    Q L Q Q L Q P V Y F P P P P R K W V K R W V P Q D T V L N Q G K L S I L K W V T E D M V A Q F T G M A A A M E E Q E A -
 
AT4G06634.1     E P E P E P T T E I L F L C S Y D G C G K T F F D V S A L R K H S H I H G E R Q Y V C D Q E G C G K K F L D S S K L K R
Sm016472_Selmo1    - - - - D L D Y E I V Y V C T F E N C G K V F T E A P A L R K H A H V H G E K Q F I C H Y D G C G K R F V D S S K L K R
pp010943_Pp1s42    - - - - E E E N E I L Y L C T F E G C G K G F A D P G S L R K H A H T H G E K Q F I C H Y D G C G K R F V D S S K L K R
 
AT4G06634.1     H Y L I H T G E R N Y I C T Y E G C G K - - - - - - - - - - - - - - - - - - - - - - - - - - A F S L D F N L R S H M K T
Sm016472_Selmo1    H F L I H T G E K H F L C K F - - C G K - - - - - - - - - - - - - - - - - - - - - - - - - - A F S L D F N L R S H M R T
pp010943_Pp1s42    H F L I H T G E K H F V C P F E G C G K V W M L S S S R R F L A C L C H V V N Q H S A T L Q A F S L D F N L R S H M R T
 
AT4G06634.1     H S Q E N Y H I C P Y S G C V K R Y A H E Y K L K N H V A A Y H E K N G G G - - - - - - - - - - E T P K Y T P P A - - -
Sm016472_Selmo1    H T G E N Y H T C P Y E D C G K R Y A H E Y K L R G H L K T H H D K - - - - - - - - - - - - - - L L P D G K Q V P L T L
pp010943_Pp1s42    H T G E N Y H A C P Y E D C G K R Y A H E Y K L R A H M R N H H D K H F D Y T S Y S P K Y L V Q S I P E M T P P P M H M
 
AT4G06634.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E K V L R T V K T P A T V C - - - - G P S S D R P Y A C P Y
Sm016472_Selmo1    E S D T S K - - - - - - - - - - - - - - - - - - - - - - - - - - - T S P A A T A A A A - - - - - A T G G G R P F A C P Y
pp010943_Pp1s42    E R D R E R D Q E L E M S R E R D R D M D R E R E R E M E K E R E I A P V G R P R S G P P R Q D V N A S D R P F A C R Y
 
AT4G06634.1     E G C E K A Y I H E Y K L K L H L K R E H P G H L Q E E N - - - A D T P T L N K H N G N D R N E I D D G S D Q D V Y R K
Sm016472_Selmo1    K G C D K R Y F Y E Y K L N L H L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp010943_Pp1s42    P G C T K R Y I H E Y K L N L H L R N S H - - - - A D E N P E F G E E P - I G R G D S D G E D D I D D G S M Q G T P A R
 
AT4G06634.1     H A S N G K G Q T H K Q Q S R A K P N M - - R T P P A K V G K K G S T S S P A K A - - - - R I A K K P W Q A K E T F - -
Sm016472_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K R G H - - - - - - - - - - - - - - - - - - - - - - - - - -
pp010943_Pp1s42    A A A T A R G - - - - - S G R G K L K I I P K R D P A K Q Q R R G H L K A Q K E V D L N L R V R T L P S E T L P T Y W R
 
AT4G06634.1     - E E V E R E E E E D S E E T E - E D R D N V E D - G W R F - - - - G E - - - - - N N E D D D D D E E T E Y E D
Sm016472_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp010943_Pp1s42    G G Q V K H T A P D D S E E T E D E D A E N T E D E G Y R Y Y N G R G E G A M A V D D E D T E D D G D Q - - - -
 
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