fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G06634.1 YIHEYKLKLHLKREHP at 245/387 in AT4G06634.1
YIHEYKLKLHLKREHP at 207/349 in AT4G06634.2
YIHEYKLKLHLKREHP at 238/380 in AT4G06634.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032033 YIHGYKLNLHLKTQHP in 316/516 AT4G06634.1 not_1st 0.440967283 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G06634.1     --------------MD----------HQNY---QYQNPFE-RRPILKSKAPAVKWIKEWV
Sb032033_Sorbi1 GSPSTPQPRREGEAMEYPAAAAGSGGHKYYYPPQHSQPQALRRP----PRPAARWVKQWI
                              *:          *: *   *:.:*   ***      **.:*:*:*:

AT4G06634.1     PQDIVATGGKCHLHKWVTEDTFSRLKEKEKEPDVPEPEPEPTTEILFLCSYDGCGKTFFD
Sb032033_Sorbi1 PQDLASSGGKCSLFKWVREDRYRNSKENPRVLDVEAPKPEPTTEILFLCSYDNCGKTFVD
                ***:.::**** *.*** ** : . **: :  **  *:**************.*****.*

AT4G06634.1     VSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLD
Sb032033_Sorbi1 VSALRKHAHVHNEKQYICNEPNCGKKFVDSSKLKRHYLTHTGQKDFVCPHPGCGKAFSLD
                *******:*:*.*:**:*:: .*****:********** ***:::::*.: *********

AT4G06634.1     FNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKNHVAAYHEKNGGGETPKYTP-PAEKV
Sb032033_Sorbi1 FNLRSHLKTHALENYHICPFPACGKRFTSDFKLAAHVKS-HEKIGTPIAVQHAPAPAAEK
                ******:***: *******:..* **:: ::**  ** : *** *   : :::* ** : 

AT4G06634.1     LRTVKTPATVCGPS-SDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHLQEENADTPTLN
Sb032033_Sorbi1 PRVAPKPSTPATTSYTDRPYVCPYEGCDKAYIHGYKLNLHLKTQHPEHGQEENGKVGASA
                 *.. .*:* . .* :****.******:***** ***:**** :** * ****... :  

AT4G06634.1     KHNGNDRNEIDDGSDQDVYRKH-------ASNGKGQTHKQQSRAKPNMRTPPAKVGKKGS
Sb032033_Sorbi1 GHH---------AANEQTYQYNYAEVGEIAPNPKRSKHKVHSSKAYN-----AKV----S
                 *:         .::::.*: :       *.* * ..** :*    *     ***    *

AT4G06634.1     TSSPAKARIAKKPWQAKETFEEVEREEEEDSEETEED-RDNVEDGWRFGENNEDDDDDEE
Sb032033_Sorbi1 RAMPSDIGGVRNQWPGKATY-------QDDSEETEEDGGHNIEDGWRYGNN----DDDEE
                 : *:.   .:: * .* *:       ::********  .*:*****:*:*    *****

AT4G06634.1     TEYED
Sb032033_Sorbi1 TPDED
                *  **
BoxShade v3.31 C (beta, 970507) Output
AT4G06634.1     - - - - - - - - - - - - - - M D - - - - - - - - - - H Q N Y - - - Q Y Q N P F E - R R P I L K S K A P A V K W I K E W V
Sb032033_Sorbi1    G S P S T P Q P R R E G E A M E Y P A A A A G S G G H K Y Y Y P P Q H S Q P Q A L R R P - - - - P R P A A R W V K Q W I
 
AT4G06634.1     P Q D I V A T G G K C H L H K W V T E D T F S R L K E K E K E P D V P E P E P E P T T E I L F L C S Y D G C G K T F F D
Sb032033_Sorbi1    P Q D L A S S G G K C S L F K W V R E D R Y R N S K E N P R V L D V E A P K P E P T T E I L F L C S Y D N C G K T F V D
 
AT4G06634.1     V S A L R K H S H I H G E R Q Y V C D Q E G C G K K F L D S S K L K R H Y L I H T G E R N Y I C T Y E G C G K A F S L D
Sb032033_Sorbi1    V S A L R K H A H V H N E K Q Y I C N E P N C G K K F V D S S K L K R H Y L T H T G Q K D F V C P H P G C G K A F S L D
 
AT4G06634.1     F N L R S H M K T H S Q E N Y H I C P Y S G C V K R Y A H E Y K L K N H V A A Y H E K N G G G E T P K Y T P - P A E K V
Sb032033_Sorbi1    F N L R S H L K T H A L E N Y H I C P F P A C G K R F T S D F K L A A H V K S - H E K I G T P I A V Q H A P A P A A E K
 
AT4G06634.1     L R T V K T P A T V C G P S - S D R P Y A C P Y E G C E K A Y I H E Y K L K L H L K R E H P G H L Q E E N A D T P T L N
Sb032033_Sorbi1    P R V A P K P S T P A T T S Y T D R P Y V C P Y E G C D K A Y I H G Y K L N L H L K T Q H P E H G Q E E N G K V G A S A
 
AT4G06634.1     K H N G N D R N E I D D G S D Q D V Y R K H - - - - - - - A S N G K G Q T H K Q Q S R A K P N M R T P P A K V G K K G S
Sb032033_Sorbi1    G H H - - - - - - - - - A A N E Q T Y Q Y N Y A E V G E I A P N P K R S K H K V H S S K A Y N - - - - - A K V - - - - S
 
AT4G06634.1     T S S P A K A R I A K K P W Q A K E T F E E V E R E E E E D S E E T E E D - R D N V E D G W R F G E N N E D D D D D E E
Sb032033_Sorbi1    R A M P S D I G G V R N Q W P G K A T Y - - - - - - - Q D D S E E T E E D G G H N I E D G W R Y G N N - - - - D D D E E
 
AT4G06634.1     T E Y E D
Sb032033_Sorbi1    T P D E D
 
0