fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G06634.1 YIHEYKLKLHLKREHP at 245/387 in AT4G06634.1
YIHEYKLKLHLKREHP at 207/349 in AT4G06634.2
YIHEYKLKLHLKREHP at 238/380 in AT4G06634.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027338 IVVPVRLCLCLSLLVC in 453/467 AT4G06634.1 1st_1st 0.446657183 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G06634.1     MDHQNYQYQNPFERRPI-----LKSKAPAV-------KWIKEWVPQDIVATGGKCHLHKW
Sb027338_Sorbi1 ----------PCPSPPLPPAGSLPSPRPEMQVARRRYRWVKEWVPQDLVVAGGPCTLYKW
                          *    *:     * *  * :       :*:*******:*.:** * *:**

AT4G06634.1     VTEDTFSRLKEKEKEPDVPEPEPEPTTEILFLCSYDGCGKTFFDVSALRKHSHIHGERQY
Sb027338_Sorbi1 VREDRLAALKAKDKEQGAESATPEPNSEVLFLCSYEGCGKTFFDAGALRKHAHVHGERQY
                * ** :: ** *:** .. .. ***.:*:******:********..*****:*:******

AT4G06634.1     VCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYH
Sb027338_Sorbi1 ICHYENCGKKFLDSSKLKRHFLIHTGEKNFVCPHEGCGKAFSLDFNLKAHMKTHSADNYH
                :*. *.**************:******:*::*.:*************::****** :***

AT4G06634.1     ICPYSGCVKRYAHEYKLKNHVAAYHEKNGGGETP------------KYTPPAEKVLRTVK
Sb027338_Sorbi1 VCQYPECGRRFTQESKLRAHIRQQHEKAVGLQNPGASTTNHIVIGDQHQPP-----KPAK
                :* *. * :*:::* **: *:   ***  * :.*            :: **     :..*

AT4G06634.1     TPATVCGPSSDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHLQEENADTPTLNKHNGND
Sb027338_Sorbi1 VSATPPAPSAERPYVCPYDGCDKAYIHEYKLNLHLKKEHPNHYQD------------GGP
                ..**  .**::***.***:**:*********:****:***.* *:            *. 

AT4G06634.1     RNEIDDGSDQDVYRKHASNGKGQTHKQQSRAKPNM--RTPPAKVGK-KGSTSSPAKA--R
Sb027338_Sorbi1 RG--------------AAPSKRNISKSSHRSKPDVTPRMPTAKIPKHKGGYVAPLPAVNL
                *.              *: .* :  *.. *:**::  * *.**: * **.  :*  *   

AT4G06634.1     IAKKPWQAKETFEEVEREEEEDSEETEEDRD-NVEDGWRFGENNEDDDDDEETEYED
Sb027338_Sorbi1 PEEQQWPRKGMY-------EVDSEETEEEGDNNVEDRWNY--NRAVSSDDEETEDEE
                  :: *  *  :       * *******: * **** *.:  *.  ..****** *:
BoxShade v3.31 C (beta, 970507) Output
AT4G06634.1     M D H Q N Y Q Y Q N P F E R R P I - - - - - L K S K A P A V - - - - - - - K W I K E W V P Q D I V A T G G K C H L H K W
Sb027338_Sorbi1    - - - - - - - - - - P C P S P P L P P A G S L P S P R P E M Q V A R R R Y R W V K E W V P Q D L V V A G G P C T L Y K W
 
AT4G06634.1     V T E D T F S R L K E K E K E P D V P E P E P E P T T E I L F L C S Y D G C G K T F F D V S A L R K H S H I H G E R Q Y
Sb027338_Sorbi1    V R E D R L A A L K A K D K E Q G A E S A T P E P N S E V L F L C S Y E G C G K T F F D A G A L R K H A H V H G E R Q Y
 
AT4G06634.1     V C D Q E G C G K K F L D S S K L K R H Y L I H T G E R N Y I C T Y E G C G K A F S L D F N L R S H M K T H S Q E N Y H
Sb027338_Sorbi1    I C H Y E N C G K K F L D S S K L K R H F L I H T G E K N F V C P H E G C G K A F S L D F N L K A H M K T H S A D N Y H
 
AT4G06634.1     I C P Y S G C V K R Y A H E Y K L K N H V A A Y H E K N G G G E T P - - - - - - - - - - - - K Y T P P A E K V L R T V K
Sb027338_Sorbi1    V C Q Y P E C G R R F T Q E S K L R A H I R Q Q H E K A V G L Q N P G A S T T N H I V I G D Q H Q P P - - - - - K P A K
 
AT4G06634.1     T P A T V C G P S S D R P Y A C P Y E G C E K A Y I H E Y K L K L H L K R E H P G H L Q E E N A D T P T L N K H N G N D
Sb027338_Sorbi1    V S A T P P A P S A E R P Y V C P Y D G C D K A Y I H E Y K L N L H L K K E H P N H Y Q D - - - - - - - - - - - - G G P
 
AT4G06634.1     R N E I D D G S D Q D V Y R K H A S N G K G Q T H K Q Q S R A K P N M - - R T P P A K V G K - K G S T S S P A K A - - R
Sb027338_Sorbi1    R G - - - - - - - - - - - - - - A A P S K R N I S K S S H R S K P D V T P R M P T A K I P K H K G G Y V A P L P A V N L
 
AT4G06634.1     I A K K P W Q A K E T F E E V E R E E E E D S E E T E E D R D - N V E D G W R F G E N N E D D D D D E E T E Y E D
Sb027338_Sorbi1    P E E Q Q W P R K G M Y - - - - - - - E V D S E E T E E E G D N N V E D R W N Y - - N R A V S S D D E E T E D E E
 
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