fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G06634.1 YIHEYKLKLHLKREHP at 245/387 in AT4G06634.1
YIHEYKLKLHLKREHP at 207/349 in AT4G06634.2
YIHEYKLKLHLKREHP at 238/380 in AT4G06634.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm021110 YIHEYKLRLHLKREHP in 197/322 AT4G06634.1 not_1st 0.516358463 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G06634.1     MDHQNYQYQNPFERRPILKSKAPAVKWIKEWVPQDIVATGGKCHLHKWVTEDTFSRLKEK
gm021110_Glyma0 -------------------------------------------MILKWVTEDTLKTLKEK
                                                            : *******:. ****

AT4G06634.1     EKEPDVPEPEPEPTTEILFLCSYDGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFL
gm021110_Glyma0 VKEPSVPEPEPEPTTEVLFLCSYDGCGKTFIDAGALRKHSHIHGERQYVCHYDGCGKKFL
                 ***.***********:*************:*..****************. :*******

AT4G06634.1     DSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYA
gm021110_Glyma0 DSSKLKRHFLIHTGERDFVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYA
                ********:*******:::*.:******************************..* ****

AT4G06634.1     HEYKLKNHVAAYHEKNGGGETPKYTPPAEKVLRTVKTPATVCGP-SSDRPYACPYEGCEK
gm021110_Glyma0 HEYKLKNHIASHHEK-------YTTPPPEKQTKTSKPSGGAYGSASSDRPYACPYDGCEK
                ********:*::***         ***.**  :* *... . *. **********:****

AT4G06634.1     AYIHEYKLKLHLKREHPGHLQEENADTPTLNKHNGNDRNEIDDGSDQDVYRKHASNGKGQ
gm021110_Glyma0 AYIHEYKLRLHLKREHPGLMADENAE-----HAQANVGNEMDEASDHDAYVAKRSNGKIQ
                ********:********* : :***:     : :.*  **:*:.**:*.*  : **** *

AT4G06634.1     THKQQSRAKPNMRTPPAKVGKKGSTSSPAKARIAKKPWQAKETFEEVEREEEEDSEETEE
gm021110_Glyma0 ---KQSKPKPNLKLPPSKIAKR-KVSTPTLT-VNKNSWPVKD-----EPFDEEDSEETEE
                   :**:.***:: **:*:.*: ..*:*: : : *:.* .*:     *  :*********

AT4G06634.1     DRDNVEDGWRF-GENNEDDDDDEETEYED
gm021110_Glyma0 DRDNVEDGWRYAGGNNE--DDDEETEYED
                **********: * ***  **********
BoxShade v3.31 C (beta, 970507) Output
AT4G06634.1     M D H Q N Y Q Y Q N P F E R R P I L K S K A P A V K W I K E W V P Q D I V A T G G K C H L H K W V T E D T F S R L K E K
gm021110_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M I L K W V T E D T L K T L K E K
 
AT4G06634.1     E K E P D V P E P E P E P T T E I L F L C S Y D G C G K T F F D V S A L R K H S H I H G E R Q Y V C D Q E G C G K K F L
gm021110_Glyma0    V K E P S V P E P E P E P T T E V L F L C S Y D G C G K T F I D A G A L R K H S H I H G E R Q Y V C H Y D G C G K K F L
 
AT4G06634.1     D S S K L K R H Y L I H T G E R N Y I C T Y E G C G K A F S L D F N L R S H M K T H S Q E N Y H I C P Y S G C V K R Y A
gm021110_Glyma0    D S S K L K R H F L I H T G E R D F V C P H E G C G K A F S L D F N L R S H M K T H S Q E N Y H I C P Y P D C G K R Y A
 
AT4G06634.1     H E Y K L K N H V A A Y H E K N G G G E T P K Y T P P A E K V L R T V K T P A T V C G P - S S D R P Y A C P Y E G C E K
gm021110_Glyma0    H E Y K L K N H I A S H H E K - - - - - - - Y T T P P P E K Q T K T S K P S G G A Y G S A S S D R P Y A C P Y D G C E K
 
AT4G06634.1     A Y I H E Y K L K L H L K R E H P G H L Q E E N A D T P T L N K H N G N D R N E I D D G S D Q D V Y R K H A S N G K G Q
gm021110_Glyma0    A Y I H E Y K L R L H L K R E H P G L M A D E N A E - - - - - H A Q A N V G N E M D E A S D H D A Y V A K R S N G K I Q
 
AT4G06634.1     T H K Q Q S R A K P N M R T P P A K V G K K G S T S S P A K A R I A K K P W Q A K E T F E E V E R E E E E D S E E T E E
gm021110_Glyma0    - - - K Q S K P K P N L K L P P S K I A K R - K V S T P T L T - V N K N S W P V K D - - - - - E P F D E E D S E E T E E
 
AT4G06634.1     D R D N V E D G W R F - G E N N E D D D D D E E T E Y E D
gm021110_Glyma0    D R D N V E D G W R Y A G G N N E - - D D D E E T E Y E D
 
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