fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G06634.1 YIHEYKLKLHLKREHP at 245/387 in AT4G06634.1
YIHEYKLKLHLKREHP at 207/349 in AT4G06634.2
YIHEYKLKLHLKREHP at 238/380 in AT4G06634.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm012683 YIHEYKLRLHLKREHP in 246/371 AT4G06634.1 1st_1st 0.617354196 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G06634.1     MDHQNYQYQNP-FERRPILKSKAPAVKWIKEWVPQDIVATGGKCHLHKWVTEDTFSRLKE
gm012683_Glyma0 ---MEIHYSNSYFERRPILKSKAAAVKWVKEWVPQDLVTTGGKCMILKWVTEDTLKTLKE
                    : :*.*. ***********.****:*******:*:***** : *******:. ***

AT4G06634.1     KEKEPDVPEPEPEPTTEILFLCSYDGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKF
gm012683_Glyma0 KVKEPSVPEPEPEPTTEVLFLCSYDGCGKTFIDAGALRKHSHIHGERQYVCHYDGCGKKF
                * ***.***********:*************:*..****************. :******

AT4G06634.1     LDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRY
gm012683_Glyma0 LDSSKLKRHFLIHTGERDFVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRY
                *********:*******:::*.:******************************..* ***

AT4G06634.1     AHEYKLKNHVAAYHEKNGGGETPKY-TPPAEKVLRTVKTPATVCGP-SSDRPYACPYEGC
gm012683_Glyma0 AHEYKLKNHIASHHEKNASVDVTKYTTPPSEKQTKTSKPSGGAYGSASSDRPYACPYDGC
                *********:*::****.. :..** ***:**  :* *... . *. **********:**

AT4G06634.1     EKAYIHEYKLKLHLKREHPGHLQEENADTPTLNKHNGNDRNEIDDGSDQDVYRKHASNGK
gm012683_Glyma0 EKAYIHEYKLRLHLKREHPGLMADENAE-----HAQANVDNEMDEASDHDAYVAKRSNGK
                **********:********* : :***:     : :.*  **:*:.**:*.*  : ****

AT4G06634.1     GQTHKQQSRAKPNMRTPPAKVGKKGSTSSPAKARIAKKPWQAKETFEEVEREEEEDSEET
gm012683_Glyma0 IQ---KQSKPKPNLKLPPSKIAKR-KLSTPSLT-VNKNSWPVKD-----EPFDEEDSEET
                 *   :**:.***:: **:*:.*: . *:*: : : *:.* .*:     *  :*******

AT4G06634.1     EEDRDNVEDGWRF-GENNEDDDDDEETEYED
gm012683_Glyma0 EEDRDNVEDGWRYAGGNNE--DDDEETEYED
                ************: * ***  **********
BoxShade v3.31 C (beta, 970507) Output
AT4G06634.1     M D H Q N Y Q Y Q N P - F E R R P I L K S K A P A V K W I K E W V P Q D I V A T G G K C H L H K W V T E D T F S R L K E
gm012683_Glyma0    - - - M E I H Y S N S Y F E R R P I L K S K A A A V K W V K E W V P Q D L V T T G G K C M I L K W V T E D T L K T L K E
 
AT4G06634.1     K E K E P D V P E P E P E P T T E I L F L C S Y D G C G K T F F D V S A L R K H S H I H G E R Q Y V C D Q E G C G K K F
gm012683_Glyma0    K V K E P S V P E P E P E P T T E V L F L C S Y D G C G K T F I D A G A L R K H S H I H G E R Q Y V C H Y D G C G K K F
 
AT4G06634.1     L D S S K L K R H Y L I H T G E R N Y I C T Y E G C G K A F S L D F N L R S H M K T H S Q E N Y H I C P Y S G C V K R Y
gm012683_Glyma0    L D S S K L K R H F L I H T G E R D F V C P H E G C G K A F S L D F N L R S H M K T H S Q E N Y H I C P Y P D C G K R Y
 
AT4G06634.1     A H E Y K L K N H V A A Y H E K N G G G E T P K Y - T P P A E K V L R T V K T P A T V C G P - S S D R P Y A C P Y E G C
gm012683_Glyma0    A H E Y K L K N H I A S H H E K N A S V D V T K Y T T P P S E K Q T K T S K P S G G A Y G S A S S D R P Y A C P Y D G C
 
AT4G06634.1     E K A Y I H E Y K L K L H L K R E H P G H L Q E E N A D T P T L N K H N G N D R N E I D D G S D Q D V Y R K H A S N G K
gm012683_Glyma0    E K A Y I H E Y K L R L H L K R E H P G L M A D E N A E - - - - - H A Q A N V D N E M D E A S D H D A Y V A K R S N G K
 
AT4G06634.1     G Q T H K Q Q S R A K P N M R T P P A K V G K K G S T S S P A K A R I A K K P W Q A K E T F E E V E R E E E E D S E E T
gm012683_Glyma0    I Q - - - K Q S K P K P N L K L P P S K I A K R - K L S T P S L T - V N K N S W P V K D - - - - - E P F D E E D S E E T
 
AT4G06634.1     E E D R D N V E D G W R F - G E N N E D D D D D E E T E Y E D
gm012683_Glyma0    E E D R D N V E D G W R Y A G G N N E - - D D D E E T E Y E D
 
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