fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G06746.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os023742 not found in 184aa AT4G36900.1 1st_not 0.42578125 II
Sb033446 not found in 424aa AT2G23340.1 1st_not 0.421875 II
Gm001918 not found in 168aa AT4G36900.1 1st_not 0.49609375 II
Pt016489 not found in 155aa AT1G46768.1 1st_not 0.48828125 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G06746.1     MVIQ-----YKRKQEF-----------PMVKEGMVMTEKPKRNLISSNEKRYKGIRMRKW
gm001918_Glyma0 --MESE--GRREGG---------------ERETTAATRK-----VEGAERRYKGIRMRKW
Sb033446_Sorbi1 -PHDHHHHPRRSGNKL------LLPNQPGGWRGTPLPSARRRS-----PRRLPRFRCRPR
Os023742_Os06t0 --MD-----RREATVFLPPPPPPQPTQPQQQPAAAAVRAPVGGRGGGGGRQYRGVRMRKW
pt016489_POPTR_ ----------MEGGCC------TSSTSTPSSTSTATTEKRKHSRQQNQEKPYRGIRMRKW
                                                                 :    .* *  

AT4G06746.1     GKW----------------VAEIREPNK--------------------------RSRIWL
gm001918_Glyma0 GKW----------------VAEIREPNK--------------------------RSRIWL
Sb033446_Sorbi1 RCWAPVVERLRRRQGTAEAAAEVEEEEEEGGSIAAFGCASGASGWRRSASRTSGRGSGWV
Os023742_Os06t0 GKW----------------VAEIREPNK--------------------------RSRIWL
pt016489_POPTR_ GKW----------------VAEIREPNK--------------------------RSRIWL
                  *                .**:.* ::                          *.  *:

AT4G06746.1     GS-------------YKTAVAAARAYDTAVFYLRGPSARLNFPEEVFKDGNGGEGLGG--
gm001918_Glyma0 GS-------------YSTPVAAARAYDTAVFYLRGPSARLNFPELLVREGPAALVAGC--
Sb033446_Sorbi1 PTPPPSPPRAPTTRPCSTSAAAPRGSTSPT----SSTAR-RWPITPRATGTAARGRGS--
Os023742_Os06t0 GS-------------YSTAVAAARAYDTAVFYLRGRSARLNFPDQLDGAGGGGAGAGGAE
pt016489_POPTR_ GS-------------YSTPIAAARAYDTAVFYLRGPSARLNFPDLIYQEDELR-------
                 :              .*. **.*.  :..    . :** .:*      .          

AT4G06746.1     ---DMSPTLIRKKAAEVGARVDAELRL-----------------------ENRMV-----
gm001918_Glyma0 ---DMSAASIRKKATEVGARVDALQATLHHH-------------YVPP----RQLLSGGG
Sb033446_Sorbi1 --RPPPSARRRPRSAPASTRSTAALALASLAAVLPLRSRCRPTIAAAP----RTPTSTGS
Os023742_Os06t0 DHRELTAAVIRKKAAEVGARVDAQHSVVGAAAPVPLQ------PPQPPPPQRRRT-----
pt016489_POPTR_ ---DVSAASIRKKATEVGAKVDALQTAVH----------------ASPEDNSRVLLS---
                     ..:  * ::: ..::  *                             *       

AT4G06746.1     ----ENL----DMNK---LP----------EAYGL--
gm001918_Glyma0 GGSGDFPVRVVDLNK---MPEPESS---DCE-WDVN-
Sb033446_Sorbi1 PP--RTPQTTSDFVVVLLLPHPSTTLLVLRQNYSPKG
Os023742_Os06t0 ----KNP----DLNR---EPTPDTS---DDE------
pt016489_POPTR_ ----EKP----DLNK---F--PENS---DEE------
                           *:                 :
BoxShade v3.31 C (beta, 970507) Output
AT4G06746.1     M V I Q - - - - - Y K R K Q E F - - - - - - - - - - - P M V K E G M V M T E K P K R N L I S S N E K R Y K G I R M R K W
gm001918_Glyma0    - - M E S E - - G R R E G G - - - - - - - - - - - - - - - E R E T T A A T R K - - - - - V E G A E R R Y K G I R M R K W
Sb033446_Sorbi1    - P H D H H H H P R R S G N K L - - - - - - L L P N Q P G G W R G T P L P S A R R R S - - - - - P R R L P R F R C R P R
Os023742_Os06t0    - - M D - - - - - R R E A T V F L P P P P P P Q P T Q P Q Q Q P A A A A V R A P V G G R G G G G G R Q Y R G V R M R K W
pt016489_POPTR_    - - - - - - - - - - M E G G C C - - - - - - T S S T S T P S S T S T A T T E K R K H S R Q Q N Q E K P Y R G I R M R K W
 
AT4G06746.1     G K W - - - - - - - - - - - - - - - - V A E I R E P N K - - - - - - - - - - - - - - - - - - - - - - - - - - R S R I W L
gm001918_Glyma0    G K W - - - - - - - - - - - - - - - - V A E I R E P N K - - - - - - - - - - - - - - - - - - - - - - - - - - R S R I W L
Sb033446_Sorbi1    R C W A P V V E R L R R R Q G T A E A A A E V E E E E E E G G S I A A F G C A S G A S G W R R S A S R T S G R G S G W V
Os023742_Os06t0    G K W - - - - - - - - - - - - - - - - V A E I R E P N K - - - - - - - - - - - - - - - - - - - - - - - - - - R S R I W L
pt016489_POPTR_    G K W - - - - - - - - - - - - - - - - V A E I R E P N K - - - - - - - - - - - - - - - - - - - - - - - - - - R S R I W L
 
AT4G06746.1     G S - - - - - - - - - - - - - Y K T A V A A A R A Y D T A V F Y L R G P S A R L N F P E E V F K D G N G G E G L G G - -
gm001918_Glyma0    G S - - - - - - - - - - - - - Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E L L V R E G P A A L V A G C - -
Sb033446_Sorbi1    P T P P P S P P R A P T T R P C S T S A A A P R G S T S P T - - - - S S T A R - R W P I T P R A T G T A A R G R G S - -
Os023742_Os06t0    G S - - - - - - - - - - - - - Y S T A V A A A R A Y D T A V F Y L R G R S A R L N F P D Q L D G A G G G G A G A G G A E
pt016489_POPTR_    G S - - - - - - - - - - - - - Y S T P I A A A R A Y D T A V F Y L R G P S A R L N F P D L I Y Q E D E L R - - - - - - -
 
AT4G06746.1     - - - D M S P T L I R K K A A E V G A R V D A E L R L - - - - - - - - - - - - - - - - - - - - - - - E N R M V - - - - -
gm001918_Glyma0    - - - D M S A A S I R K K A T E V G A R V D A L Q A T L H H H - - - - - - - - - - - - - Y V P P - - - - R Q L L S G G G
Sb033446_Sorbi1    - - R P P P S A R R R P R S A P A S T R S T A A L A L A S L A A V L P L R S R C R P T I A A A P - - - - R T P T S T G S
Os023742_Os06t0    D H R E L T A A V I R K K A A E V G A R V D A Q H S V V G A A A P V P L Q - - - - - - P P Q P P P P Q R R R T - - - - -
pt016489_POPTR_    - - - D V S A A S I R K K A T E V G A K V D A L Q T A V H - - - - - - - - - - - - - - - - A S P E D N S R V L L S - - -
 
AT4G06746.1     - - - - E N L - - - - D M N K - - - L P - - - - - - - - - - E A Y G L - -
gm001918_Glyma0    G G S G D F P V R V V D L N K - - - M P E P E S S - - - D C E - W D V N -
Sb033446_Sorbi1    P P - - R T P Q T T S D F V V V L L L P H P S T T L L V L R Q N Y S P K G
Os023742_Os06t0    - - - - K N P - - - - D L N R - - - E P T P D T S - - - D D E - - - - - -
pt016489_POPTR_    - - - - E K P - - - - D L N K - - - F - - P E N S - - - D E E - - - - - -
 
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