fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G06746.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016489 not found in 155aa AT1G46768.1 1st_not 0.48828125 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G06746.1     MVIQYKRKQEFPMVKEG--------------MVMTEKPKRNLISSNEKRYKGIRMRKWGK
pt016489_POPTR_ --------------MEGGCCTSSTSTPSSTSTATTEKRKHSRQQNQEKPYRGIRMRKWGK
                               **               . *** *:.  ..:** *:*********

AT4G06746.1     WVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNFPEEVFKDGNGGEGLG
pt016489_POPTR_ WVAEIREPNKRSRIWLGSYSTPIAAARAYDTAVFYLRGPSARLNFPDLIYQ-----EDEL
                *******************.*.:***********************: :::     *.  

AT4G06746.1     GDMSPTLIRKKAAEVGARVDA---------ELRLENRMVENLDMNKLPEAYGL-
pt016489_POPTR_ RDVSAASIRKKATEVGAKVDALQTAVHASPEDNSRVLLSEKPDLNKFPENSDEE
                 *:*.: *****:****:***         * . .  : *: *:**:**  .
BoxShade v3.31 C (beta, 970507) Output
AT4G06746.1     M V I Q Y K R K Q E F P M V K E G - - - - - - - - - - - - - - M V M T E K P K R N L I S S N E K R Y K G I R M R K W G K
pt016489_POPTR_    - - - - - - - - - - - - - - M E G G C C T S S T S T P S S T S T A T T E K R K H S R Q Q N Q E K P Y R G I R M R K W G K
 
AT4G06746.1     W V A E I R E P N K R S R I W L G S Y K T A V A A A R A Y D T A V F Y L R G P S A R L N F P E E V F K D G N G G E G L G
pt016489_POPTR_    W V A E I R E P N K R S R I W L G S Y S T P I A A A R A Y D T A V F Y L R G P S A R L N F P D L I Y Q - - - - - E D E L
 
AT4G06746.1     G D M S P T L I R K K A A E V G A R V D A - - - - - - - - - E L R L E N R M V E N L D M N K L P E A Y G L -
pt016489_POPTR_    R D V S A A S I R K K A T E V G A K V D A L Q T A V H A S P E D N S R V L L S E K P D L N K F P E N S D E E
 
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