fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G06746.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001651 not found in 187aa AT5G67190.1 not_not 0.4765625 III
Pt036987 not found in 181aa AT5G67190.1 not_not 0.46875 III
Pt038369 not found in 158aa AT1G46768.1 not_not 0.453125 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G06746.1     MVIQYKRKQE------------FPMVKEGMVMTEKPKRNLISSNEKRYKGIRMRKWGKWV
pt001651_POPTR_ --------ME------------SGVDKE----MATRKRGGMGS-ERQYKGIRMRKWGKWV
pt036987_POPTR_ --------ME------------SGVDKD----MATRKRGGMES-ERQYKGIRMRKWGKWV
pt038369_POPTR_ --------MEGECYTSPSASSSTPTISS----IGKRKHGRQQNQEKPYRGIRMRKWGKWV
                         *                ..      . *:.   . *: *:***********

AT4G06746.1     AEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNFPEEVFKDGNGGEGLGGD
pt001651_POPTR_ AEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPEFLAGENFSCGGSYGD
pt036987_POPTR_ AEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPEVLAAEGFGGGGSCGD
pt038369_POPTR_ AEIREPNKRSRIWLGSYSTPIAAARAYDTAVFYLRGPSVRLNFPDLIHQEDELC-----D
                *****************.*.:*****************.*****: :  :.        *

AT4G06746.1     MSPTLIRKKAAEVGARVDA-ELRL---------------------------------ENR
pt001651_POPTR_ MSAASIRKRATEVGARVDAFETALNHHHHR----HHDDRQRNSSNSTSSNDNNETVVDSR
pt036987_POPTR_ MSAASIRKRATEVGAHVDAIETALNHHHHHHHHLHHDDRQRNSNNSSSSNDNNETVVDSR
pt038369_POPTR_ VSAASIRKKATEVGAKVDALQTAL----------H-----------ASPGDNSPA---NR
                :*.: ***:*:****:*** :  *                                  .*

AT4G06746.1     MV--ENLDMNKLPEAYGL------------------
pt001651_POPTR_ ELKSRPVDLNKVPDPEDSDGDEWERSLATGGNPMGC
pt036987_POPTR_ ELKPRPVDLNKVPDPEDSDGDEWKRS----------
pt038369_POPTR_ LLLSEKPDLNEYPENCDEE-----------------
                 :  .  *:*: *:  .
BoxShade v3.31 C (beta, 970507) Output
AT4G06746.1     M V I Q Y K R K Q E - - - - - - - - - - - - F P M V K E G M V M T E K P K R N L I S S N E K R Y K G I R M R K W G K W V
pt001651_POPTR_    - - - - - - - - M E - - - - - - - - - - - - S G V D K E - - - - M A T R K R G G M G S - E R Q Y K G I R M R K W G K W V
pt036987_POPTR_    - - - - - - - - M E - - - - - - - - - - - - S G V D K D - - - - M A T R K R G G M E S - E R Q Y K G I R M R K W G K W V
pt038369_POPTR_    - - - - - - - - M E G E C Y T S P S A S S S T P T I S S - - - - I G K R K H G R Q Q N Q E K P Y R G I R M R K W G K W V
 
AT4G06746.1     A E I R E P N K R S R I W L G S Y K T A V A A A R A Y D T A V F Y L R G P S A R L N F P E E V F K D G N G G E G L G G D
pt001651_POPTR_    A E I R E P N K R S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E F L A G E N F S C G G S Y G D
pt036987_POPTR_    A E I R E P N K R S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E V L A A E G F G G G G S C G D
pt038369_POPTR_    A E I R E P N K R S R I W L G S Y S T P I A A A R A Y D T A V F Y L R G P S V R L N F P D L I H Q E D E L C - - - - - D
 
AT4G06746.1     M S P T L I R K K A A E V G A R V D A - E L R L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E N R
pt001651_POPTR_    M S A A S I R K R A T E V G A R V D A F E T A L N H H H H R - - - - H H D D R Q R N S S N S T S S N D N N E T V V D S R
pt036987_POPTR_    M S A A S I R K R A T E V G A H V D A I E T A L N H H H H H H H H L H H D D R Q R N S N N S S S S N D N N E T V V D S R
pt038369_POPTR_    V S A A S I R K K A T E V G A K V D A L Q T A L - - - - - - - - - - H - - - - - - - - - - - A S P G D N S P A - - - N R
 
AT4G06746.1     M V - - E N L D M N K L P E A Y G L - - - - - - - - - - - - - - - - - -
pt001651_POPTR_    E L K S R P V D L N K V P D P E D S D G D E W E R S L A T G G N P M G C
pt036987_POPTR_    E L K P R P V D L N K V P D P E D S D G D E W K R S - - - - - - - - - -
pt038369_POPTR_    L L L S E K P D L N E Y P E N C D E E - - - - - - - - - - - - - - - - -
 
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