fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G06746.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016489 not found in 155aa AT1G46768.1 1st_not 0.48828125 II
Pt001651 not found in 187aa AT5G67190.1 not_not 0.4765625 III
Pt036987 not found in 181aa AT5G67190.1 not_not 0.46875 III
Pt038369 not found in 158aa AT1G46768.1 not_not 0.453125 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G06746.1     MVIQYKRKQEFPMVKEG--------------MVMTEKPKRNLIS---SNEKRYKGIRMRK
pt036987_POPTR_ --------------ME----------------SGVDKDMATRKRGGMESERQYKGIRMRK
pt016489_POPTR_ --------------MEGGCCTSSTSTPSSTSTATTEKRKHSRQQ---NQEKPYRGIRMRK
pt038369_POPTR_ --------------MEGECYTSPSASSSTPTISSIGKRKHGRQQ---NQEKPYRGIRMRK
pt001651_POPTR_ --------------ME----------------SGVDKEMATRKRGGMGSERQYKGIRMRK
                               *                    *           .*: *:******

AT4G06746.1     WGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNFPEEVFKDGNGGE
pt036987_POPTR_ WGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPEVLAAEGFGGG
pt016489_POPTR_ WGKWVAEIREPNKRSRIWLGSYSTPIAAARAYDTAVFYLRGPSARLNFPDLIYQED----
pt038369_POPTR_ WGKWVAEIREPNKRSRIWLGSYSTPIAAARAYDTAVFYLRGPSVRLNFPDLIHQED----
pt001651_POPTR_ WGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPEFLAGENFSCG
                **********************.*.:*****************.*****: :  :.    

AT4G06746.1     GLGGDMSPTLIRKKAAEVGARVDA-ELRL-------------------------------
pt036987_POPTR_ GSCGDMSAASIRKRATEVGAHVDAIETALNHHHHHHHHLHHDDRQRNSNNSSSSNDNNET
pt016489_POPTR_ -ELRDVSAASIRKKATEVGAKVDALQTAV----------H-----------ASPEDNS--
pt038369_POPTR_ -ELCDVSAASIRKKATEVGAKVDALQTAL----------H-----------ASPGDNSPA
pt001651_POPTR_ GSYGDMSAASIRKRATEVGARVDAFETALNHHHHR----HHDDRQRNSSNSTSSNDNNET
                    *:*.: ***:*:****:*** :  :                               

AT4G06746.1     --ENRMV--ENLDMNKLPEAYGL------------------
pt036987_POPTR_ VVDSRELKPRPVDLNKVPDPEDSDGDEWKRS----------
pt016489_POPTR_ ----RVLLSEKPDLNKFPENSDEE-----------------
pt038369_POPTR_ ---NRLLLSEKPDLNEYPENCDEE-----------------
pt001651_POPTR_ VVDSRELKSRPVDLNKVPDPEDSDGDEWERSLATGGNPMGC
                    * :  .  *:*: *:  .
BoxShade v3.31 C (beta, 970507) Output
AT4G06746.1     M V I Q Y K R K Q E F P M V K E G - - - - - - - - - - - - - - M V M T E K P K R N L I S - - - S N E K R Y K G I R M R K
pt036987_POPTR_    - - - - - - - - - - - - - - M E - - - - - - - - - - - - - - - - S G V D K D M A T R K R G G M E S E R Q Y K G I R M R K
pt016489_POPTR_    - - - - - - - - - - - - - - M E G G C C T S S T S T P S S T S T A T T E K R K H S R Q Q - - - N Q E K P Y R G I R M R K
pt038369_POPTR_    - - - - - - - - - - - - - - M E G E C Y T S P S A S S S T P T I S S I G K R K H G R Q Q - - - N Q E K P Y R G I R M R K
pt001651_POPTR_    - - - - - - - - - - - - - - M E - - - - - - - - - - - - - - - - S G V D K E M A T R K R G G M G S E R Q Y K G I R M R K
 
AT4G06746.1     W G K W V A E I R E P N K R S R I W L G S Y K T A V A A A R A Y D T A V F Y L R G P S A R L N F P E E V F K D G N G G E
pt036987_POPTR_    W G K W V A E I R E P N K R S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E V L A A E G F G G G
pt016489_POPTR_    W G K W V A E I R E P N K R S R I W L G S Y S T P I A A A R A Y D T A V F Y L R G P S A R L N F P D L I Y Q E D - - - -
pt038369_POPTR_    W G K W V A E I R E P N K R S R I W L G S Y S T P I A A A R A Y D T A V F Y L R G P S V R L N F P D L I H Q E D - - - -
pt001651_POPTR_    W G K W V A E I R E P N K R S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E F L A G E N F S C G
 
AT4G06746.1     G L G G D M S P T L I R K K A A E V G A R V D A - E L R L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt036987_POPTR_    G S C G D M S A A S I R K R A T E V G A H V D A I E T A L N H H H H H H H H L H H D D R Q R N S N N S S S S N D N N E T
pt016489_POPTR_    - E L R D V S A A S I R K K A T E V G A K V D A L Q T A V - - - - - - - - - - H - - - - - - - - - - - A S P E D N S - -
pt038369_POPTR_    - E L C D V S A A S I R K K A T E V G A K V D A L Q T A L - - - - - - - - - - H - - - - - - - - - - - A S P G D N S P A
pt001651_POPTR_    G S Y G D M S A A S I R K R A T E V G A R V D A F E T A L N H H H H R - - - - H H D D R Q R N S S N S T S S N D N N E T
 
AT4G06746.1     - - E N R M V - - E N L D M N K L P E A Y G L - - - - - - - - - - - - - - - - - -
pt036987_POPTR_    V V D S R E L K P R P V D L N K V P D P E D S D G D E W K R S - - - - - - - - - -
pt016489_POPTR_    - - - - R V L L S E K P D L N K F P E N S D E E - - - - - - - - - - - - - - - - -
pt038369_POPTR_    - - - N R L L L S E K P D L N E Y P E N C D E E - - - - - - - - - - - - - - - - -
pt001651_POPTR_    V V D S R E L K S R P V D L N K V P D P E D S D G D E W E R S L A T G G N P M G C
 
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