fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G06746.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb033446 not found in 424aa AT2G23340.1 1st_not 0.421875 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G06746.1     ----------------------------------------------------MVIQYKRK
Sb033446_Sorbi1 PHDHHHHPRRSGNKLLLPNQPGGWRGTPLPSARRRSPRRLPRFRCRPRRCWAPVVERLRR
                                                                     *::  *:

AT4G06746.1     QEFPMVKEGMVMTEKPKRNLI-----SSNEKRYKGIRMRKWGK---WV-----AEIREPN
Sb033446_Sorbi1 RQGTAEAAAEVEEEEEEGGSIAAFGCASGASGWRRSASRTSGRGSGWVPTPPPSPPRAPT
                :: .    . *  *: : . *     :*. . ::    *. *:   **     :  * *.

AT4G06746.1     KR-------------------SRIWLGSYKTAVAAARAYDTAVFYLRG----PSARLNFP
Sb033446_Sorbi1 TRPCSTSAAAPRGSTSPTSSTARRWPITPRATGTAARG--------RGSRPPPSARRR-P
                .*                   :* *  : ::: :***.        **    **** . *

AT4G06746.1     EEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDAELRLENRMVEN--------------
Sb033446_Sorbi1 RS---------------APASTRSTAALALASLAAVLPLRSRCRPTIAAAPRTPTSTGSP
                ..               :*:  *..** . * : * * *..*   .              

AT4G06746.1     -------------------------LDMNKLPEAYGL
Sb033446_Sorbi1 PRTPQTTSDFVVVLLLPHPSTTLLVLRQNYSPKG---
                                         *  *  *:.
BoxShade v3.31 C (beta, 970507) Output
AT4G06746.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M V I Q Y K R K
Sb033446_Sorbi1    P H D H H H H P R R S G N K L L L P N Q P G G W R G T P L P S A R R R S P R R L P R F R C R P R R C W A P V V E R L R R
 
AT4G06746.1     Q E F P M V K E G M V M T E K P K R N L I - - - - - S S N E K R Y K G I R M R K W G K - - - W V - - - - - A E I R E P N
Sb033446_Sorbi1    R Q G T A E A A A E V E E E E E E G G S I A A F G C A S G A S G W R R S A S R T S G R G S G W V P T P P P S P P R A P T
 
AT4G06746.1     K R - - - - - - - - - - - - - - - - - - - S R I W L G S Y K T A V A A A R A Y D T A V F Y L R G - - - - P S A R L N F P
Sb033446_Sorbi1    T R P C S T S A A A P R G S T S P T S S T A R R W P I T P R A T G T A A R G - - - - - - - - R G S R P P P S A R R R - P
 
AT4G06746.1     E E V F K D G N G G E G L G G D M S P T L I R K K A A E V G A R V D A E L R L E N R M V E N - - - - - - - - - - - - - -
Sb033446_Sorbi1    R S - - - - - - - - - - - - - - - A P A S T R S T A A L A L A S L A A V L P L R S R C R P T I A A A P R T P T S T G S P
 
AT4G06746.1     - - - - - - - - - - - - - - - - - - - - - - - - - L D M N K L P E A Y G L
Sb033446_Sorbi1    P R T P Q T T S D F V V V L L L P H P S T T L L V L R Q N Y S P K G - - -
 
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