fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G06746.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb030094 not found in 461aa AT2G23340.1 not_not 0.40234375 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G06746.1     ----------------------------------------MVIQYKRKQE----------
Sb030094_Sorbi1 RDGREGSQENHANAKSSCRYHCCCCCCTCLHNPQPPSAGPQVRASEREREKRQRLQQPAK
                                                         *   :*::*          

AT4G06746.1     -------FPMVKEGMVMTEKPKRNLISSNEKRYK------GIRMR--------------K
Sb030094_Sorbi1 AGAHAGRVPVFQRGV-----GGRGRGSSSSSRSRCHGSSCGRRSRRGEDGGGAGCDGGGR
                       .*:.:.*:       *.  **...* :      * * *              :

AT4G06746.1     WGKWVAEIREPN------------KRSRIWLGSY---KTAVAAARAYDTAVF-YLRGPSA
Sb030094_Sorbi1 CGGAAAGVGAPAPPAADAAASAVPRRAHAEVGQVGGGDPGAAQAHAHLAGVLRHGRGGGA
                 *  .* :  *             :*::  :*.    ....* *:*: :.*: : ** .*

AT4G06746.1     RLN--------------------------------------------------FPEEVFK
Sb030094_Sorbi1 RLRHGRVLPSRPVGAAQLPRRDPLAVAVGGRARGRGDRPRRRWWRRRHAVRGVHPEEGHR
                **.                                                  .*** .:

AT4G06746.1     DG----------NGG--------------------------EGLGGDMSPTLIRKKAA--
Sb030094_Sorbi1 GGVPRGRAPDRHDGAPAAPPRAPEAPPPPPPPPPPAAAACPRARGGGAPPAGAEAVAAAA
                .*          :*.                          .. **. .*:  .  **  

AT4G06746.1     -------EVGARVDAELRLENRMVEN--------LDMNK---------------------
Sb030094_Sorbi1 SVERARQEPGSKPGAEPRELRRRVTSERASDTARLNVNDDVRYRLFPFPRRRPALQHMPL
                       * *:: .** *  .* * .        *::*.                     

AT4G06746.1     ---LPEAYGL--
Sb030094_Sorbi1 SSPSPRTYDDPS
                    *.:*.
BoxShade v3.31 C (beta, 970507) Output
AT4G06746.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M V I Q Y K R K Q E - - - - - - - - - -
Sb030094_Sorbi1    R D G R E G S Q E N H A N A K S S C R Y H C C C C C C T C L H N P Q P P S A G P Q V R A S E R E R E K R Q R L Q Q P A K
 
AT4G06746.1     - - - - - - - F P M V K E G M V M T E K P K R N L I S S N E K R Y K - - - - - - G I R M R - - - - - - - - - - - - - - K
Sb030094_Sorbi1    A G A H A G R V P V F Q R G V - - - - - G G R G R G S S S S S R S R C H G S S C G R R S R R G E D G G G A G C D G G G R
 
AT4G06746.1     W G K W V A E I R E P N - - - - - - - - - - - - K R S R I W L G S Y - - - K T A V A A A R A Y D T A V F - Y L R G P S A
Sb030094_Sorbi1    C G G A A A G V G A P A P P A A D A A A S A V P R R A H A E V G Q V G G G D P G A A Q A H A H L A G V L R H G R G G G A
 
AT4G06746.1     R L N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F P E E V F K
Sb030094_Sorbi1    R L R H G R V L P S R P V G A A Q L P R R D P L A V A V G G R A R G R G D R P R R R W W R R R H A V R G V H P E E G H R
 
AT4G06746.1     D G - - - - - - - - - - N G G - - - - - - - - - - - - - - - - - - - - - - - - - - E G L G G D M S P T L I R K K A A - -
Sb030094_Sorbi1    G G V P R G R A P D R H D G A P A A P P R A P E A P P P P P P P P P P A A A A C P R A R G G G A P P A G A E A V A A A A
 
AT4G06746.1     - - - - - - - E V G A R V D A E L R L E N R M V E N - - - - - - - - L D M N K - - - - - - - - - - - - - - - - - - - - -
Sb030094_Sorbi1    S V E R A R Q E P G S K P G A E P R E L R R R V T S E R A S D T A R L N V N D D V R Y R L F P F P R R R P A L Q H M P L
 
AT4G06746.1     - - - L P E A Y G L - -
Sb030094_Sorbi1    S S P S P R T Y D D P S
 
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