fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G06746.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb033446 not found in 424aa AT2G23340.1 1st_not 0.421875 II
Sb030094 not found in 461aa AT2G23340.1 not_not 0.40234375 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G06746.1     ---------------MVIQY----------------------------KRKQE-------
Sb033446_Sorbi1 ------PHDHH-------------------HHP---------------RRSGNKLLLPNQ
Sb030094_Sorbi1 RDGREGSQENHANAKSSCRYHCCCCCCTCLHNPQPPSAGPQVRASEREREKRQRLQQPAK
                                                                :.. :       

AT4G06746.1     --------FPMVKEGMVMTEKPKRNLISSNEKRYK------------GIRMRKW-GKWVA
Sb033446_Sorbi1 PGGWRGTPLP-----------SARRRSPRRLPRFRCRPRRCWAPVVERLRRRQGTAEAAA
Sb030094_Sorbi1 AGAHAGR-VPVFQRG-----VGGRGRGSSSSSRSRCHGSSCGR------RSRRG------
                        .*             *   .    * :              * *:       

AT4G06746.1     EIREPNKRSRI------------W---------LGS------------------YKTAVA
Sb033446_Sorbi1 EVEEEEEEGGSIAAFGCASGASGWRRSASRTSGRGSGWVPTPPPSPPRAPTTRPCSTSAA
Sb030094_Sorbi1 -----EDGGGA----GCDGGG----RCGGAAAGVGA-------PAPPAAD-----AAASA
                     :. .                         *:                    :: *

AT4G06746.1     AAR--------------AYDTAVFYL-------RGPSARL------------------NF
Sb033446_Sorbi1 APR---------GSTSPTSSTA-----------------------------------RRW
Sb030094_Sorbi1 VPRRAHAEVGQVGGGDPGAAQAHAHLAGVLRHGRGGGARLRHGRVLPSRPVGAAQLPRRD
                ..*                  *                                    . 

AT4G06746.1     PEEVFKDGNGGEGLGGD-------------------------------------------
Sb033446_Sorbi1 PITPRATGTAARGRGSR-------------------------------------------
Sb030094_Sorbi1 PLAV-AVGGRARGRGDRPRRRWWRRRHAVRGVHPEEGHRGGVPRGRAPDRHDGAPAAPPR
                *      *  ..* *.                                            

AT4G06746.1     ---------------------MSPTLIRKKAAEVGARVDAELRLENR-------------
Sb033446_Sorbi1 -----------PPPSARRRPRSAPASTRSTAALALASLAAVLPLRSRCRPTIAAAPRTPT
Sb030094_Sorbi1 APEAPPPPPPPPPPAAAACPRARGGGAPPAGAEAVAAAASVERARQEPGSKPGAEPRELR
                                              .* . *   :    ...             

AT4G06746.1     --------------------------------MVENLD-MNKLPEAYGL--
Sb033446_Sorbi1 STGSPPRTPQTT----SDFVVVLLLPHPSTTLLVLR---QNYSPKG-----
Sb030094_Sorbi1 RRVTSERASDTARLNVNDDVRYRLFPFPRRRPALQHMPLSSPSPRTYDDPS
                                                 : .    .  *.
BoxShade v3.31 C (beta, 970507) Output
AT4G06746.1     - - - - - - - - - - - - - - - M V I Q Y - - - - - - - - - - - - - - - - - - - - - - - - - - - - K R K Q E - - - - - - -
Sb033446_Sorbi1    - - - - - - P H D H H - - - - - - - - - - - - - - - - - - - H H P - - - - - - - - - - - - - - - R R S G N K L L L P N Q
Sb030094_Sorbi1    R D G R E G S Q E N H A N A K S S C R Y H C C C C C C T C L H N P Q P P S A G P Q V R A S E R E R E K R Q R L Q Q P A K
 
AT4G06746.1     - - - - - - - - F P M V K E G M V M T E K P K R N L I S S N E K R Y K - - - - - - - - - - - - G I R M R K W - G K W V A
Sb033446_Sorbi1    P G G W R G T P L P - - - - - - - - - - - S A R R R S P R R L P R F R C R P R R C W A P V V E R L R R R Q G T A E A A A
Sb030094_Sorbi1    A G A H A G R - V P V F Q R G - - - - - V G G R G R G S S S S S R S R C H G S S C G R - - - - - - R S R R G - - - - - -
 
AT4G06746.1     E I R E P N K R S R I - - - - - - - - - - - - W - - - - - - - - - L G S - - - - - - - - - - - - - - - - - - Y K T A V A
Sb033446_Sorbi1    E V E E E E E E G G S I A A F G C A S G A S G W R R S A S R T S G R G S G W V P T P P P S P P R A P T T R P C S T S A A
Sb030094_Sorbi1    - - - - - E D G G G A - - - - G C D G G G - - - - R C G G A A A G V G A - - - - - - - P A P P A A D - - - - - A A A S A
 
AT4G06746.1     A A R - - - - - - - - - - - - - - A Y D T A V F Y L - - - - - - - R G P S A R L - - - - - - - - - - - - - - - - - - N F
Sb033446_Sorbi1    A P R - - - - - - - - - G S T S P T S S T A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R R W
Sb030094_Sorbi1    V P R R A H A E V G Q V G G G D P G A A Q A H A H L A G V L R H G R G G G A R L R H G R V L P S R P V G A A Q L P R R D
 
AT4G06746.1     P E E V F K D G N G G E G L G G D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb033446_Sorbi1    P I T P R A T G T A A R G R G S R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb030094_Sorbi1    P L A V - A V G G R A R G R G D R P R R R W W R R R H A V R G V H P E E G H R G G V P R G R A P D R H D G A P A A P P R
 
AT4G06746.1     - - - - - - - - - - - - - - - - - - - - - M S P T L I R K K A A E V G A R V D A E L R L E N R - - - - - - - - - - - - -
Sb033446_Sorbi1    - - - - - - - - - - - P P P S A R R R P R S A P A S T R S T A A L A L A S L A A V L P L R S R C R P T I A A A P R T P T
Sb030094_Sorbi1    A P E A P P P P P P P P P P A A A A C P R A R G G G A P P A G A E A V A A A A S V E R A R Q E P G S K P G A E P R E L R
 
AT4G06746.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M V E N L D - M N K L P E A Y G L - -
Sb033446_Sorbi1    S T G S P P R T P Q T T - - - - S D F V V V L L L P H P S T T L L V L R - - - Q N Y S P K G - - - - -
Sb030094_Sorbi1    R R V T S E R A S D T A R L N V N D D V R Y R L F P F P R R R P A L Q H M P L S S P S P R T Y D D P S
 
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