fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G06746.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001918 not found in 168aa AT4G36900.1 1st_not 0.49609375 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G06746.1     MVIQYKRKQEFPMVKEGMVMTEKPKRNLISSNEKRYKGIRMRKWGKWVAEIREPNKRSRI
gm001918_Glyma0 MESEGRREGG---ERETTAATRK-----VEGAERRYKGIRMRKWGKWVAEIREPNKRSRI
                *  : :*:      :*  . *.*     :.. *:**************************

AT4G06746.1     WLGSYKTAVAAARAYDTAVFYLRGPSARLNFPEEVFKDGNGGEGLGGDMSPTLIRKKAAE
gm001918_Glyma0 WLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLVREGPAALVAGCDMSAASIRKKATE
                *****.*.************************* :.::* ..   * ***.: *****:*

AT4G06746.1     VGARVDA-ELRLENRM------------------VENLDMNKLPEAYGL-------
gm001918_Glyma0 VGARVDALQATLHHHYVPPRQLLSGGGGGSGDFPVRVVDLNKMPEPESSDCEWDVN
                ******* :  *.::                   *. :*:**:**. .
BoxShade v3.31 C (beta, 970507) Output
AT4G06746.1     M V I Q Y K R K Q E F P M V K E G M V M T E K P K R N L I S S N E K R Y K G I R M R K W G K W V A E I R E P N K R S R I
gm001918_Glyma0    M E S E G R R E G G - - - E R E T T A A T R K - - - - - V E G A E R R Y K G I R M R K W G K W V A E I R E P N K R S R I
 
AT4G06746.1     W L G S Y K T A V A A A R A Y D T A V F Y L R G P S A R L N F P E E V F K D G N G G E G L G G D M S P T L I R K K A A E
gm001918_Glyma0    W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E L L V R E G P A A L V A G C D M S A A S I R K K A T E
 
AT4G06746.1     V G A R V D A - E L R L E N R M - - - - - - - - - - - - - - - - - - V E N L D M N K L P E A Y G L - - - - - - -
gm001918_Glyma0    V G A R V D A L Q A T L H H H Y V P P R Q L L S G G G G G S G D F P V R V V D L N K M P E P E S S D C E W D V N
 
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