fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G10240.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030266 not found in 297aa AT1G78600.1 not_not 0.413173652 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G10240.1     MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA
pt030266_POPTR_ MKIQCNVCEAAEANVLCCADEAALCRACDETVHAANKLASKHQRVPL------STSSPQI
                *****:*** ***:****:***.**:.** .** **** .:*:**.*      :*::.  

AT4G10240.1     PLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCNS----HQRFLLSGVQVSDQ-------
pt030266_POPTR_ PKCDICQEAAGFFFCLEDRALLCRKCDVAIHTANTHVSAHQRFLLTGVKVGLESTDPGAS
                * ******  *:********:**..** ****.*:    ******:**:*. :       

AT4G10240.1     --------------------------SLTENSECSTSF----------------------
pt030266_POPTR_ SSPGKSPSGEITTLKTKSCPVSRRGTSMPLASPCNQVFPANVCGVGEFVPAKLPYSGGSA
                                          *:.  * *.  *                      

AT4G10240.1     --SSETYQIQSKVSL---NSQY-----SSEETEAGNSGE---------------------
pt030266_POPTR_ ASSISQWQIDEFLELAEFNQHYGYMDNGSSKADSGKHGDSDCSAILRSAEEEVDDEECLG
                  * . :**:. :.*   *.:*     .*.::::*: *:                     

AT4G10240.1     -------------------------IVHKNPSVILSP-----------------------
pt030266_POPTR_ QVPDSSWAVPQIPSPPTASGLYWPKSIHHSDTAIFVPDICGSAVQNHRHCQQRGTVSKWR
                                          :*:. :.*: *                       

AT4G10240.1     ---
pt030266_POPTR_ QQL
BoxShade v3.31 C (beta, 970507) Output
AT4G10240.1     M K I Q C E V C E K A E A E V L C C S D E A V L C K P C D I K V H E A N K L F Q R H H R V A L Q K D A A S A T T A S G A
pt030266_POPTR_    M K I Q C N V C E A A E A N V L C C A D E A A L C R A C D E T V H A A N K L A S K H Q R V P L - - - - - - S T S S P Q I
 
AT4G10240.1     P L C D I C Q E R K G Y F F C L E D R A M L C N D C D E A I H T C N S - - - - H Q R F L L S G V Q V S D Q - - - - - - -
pt030266_POPTR_    P K C D I C Q E A A G F F F C L E D R A L L C R K C D V A I H T A N T H V S A H Q R F L L T G V K V G L E S T D P G A S
 
AT4G10240.1     - - - - - - - - - - - - - - - - - - - - - - - - - - S L T E N S E C S T S F - - - - - - - - - - - - - - - - - - - - - -
pt030266_POPTR_    S S P G K S P S G E I T T L K T K S C P V S R R G T S M P L A S P C N Q V F P A N V C G V G E F V P A K L P Y S G G S A
 
AT4G10240.1     - - S S E T Y Q I Q S K V S L - - - N S Q Y - - - - - S S E E T E A G N S G E - - - - - - - - - - - - - - - - - - - - -
pt030266_POPTR_    A S S I S Q W Q I D E F L E L A E F N Q H Y G Y M D N G S S K A D S G K H G D S D C S A I L R S A E E E V D D E E C L G
 
AT4G10240.1     - - - - - - - - - - - - - - - - - - - - - - - - - I V H K N P S V I L S P - - - - - - - - - - - - - - - - - - - - - - -
pt030266_POPTR_    Q V P D S S W A V P Q I P S P P T A S G L Y W P K S I H H S D T A I F V P D I C G S A V Q N H R H C Q Q R G T V S K W R
 
AT4G10240.1     - - -
pt030266_POPTR_    Q Q L
 
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