fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G10240.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt025651 not found in 298aa AT1G78600.1 1st_not 0.419161676 II
Pt030266 not found in 297aa AT1G78600.1 not_not 0.413173652 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G10240.1     MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA
pt025651_POPTR_ MKIQCNVCEAAEAKVLCCADEAALCWTCDEKVHAANKLASKHQRIPL------STSSPQM
pt030266_POPTR_ MKIQCNVCEAAEANVLCCADEAALCRACDETVHAANKLASKHQRVPL------STSSPQI
                *****:*** ***:****:***.** .** .** **** .:*:*:.*      :*::.  

AT4G10240.1     PLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCNS----HQRFLLSGVQVSDQSLTENSE
pt025651_POPTR_ PKCDICQETAGFFFCLEDRALLCRKCDVAIHTANTHVSVHQRFLLTGVKVGLEPTDPGAS
pt030266_POPTR_ PKCDICQEAAGFFFCLEDRALLCRKCDVAIHTANTHVSAHQRFLLTGVKVGLESTDPGAS
                * ******  *:********:**..** ****.*:    ******:**:*. :.   .:.

AT4G10240.1     CST--SFSSETYQIQSK-------------------------------------------
pt025651_POPTR_ SSSGKSPSGEKKTLETKSRPVSRRGTLLPLANPCNQVSTVNVCGVGDFGPAKLPYSGGSA
pt030266_POPTR_ SSPGKSPSGEITTLKTKSCPVSRRGTSMPLASPCNQVFPANVCGVGEFVPAKLPYSGGSA
                .*.  * *.*   :::*                                           

AT4G10240.1     ---------------VSLNSQY-----SSEETEAGNSGE---------------------
pt025651_POPTR_ TSSISQWHIDEFLDLPEFNQNYGYIDNGSSKADSGKRGDSDCSAILRSTEEEVDDEECLG
pt030266_POPTR_ ASSISQWQIDEFLELAEFNQHYGYMDNGSSKADSGKHGDSDCSAILRSAEEEVDDEECLG
                                .:*.:*     .*.::::*: *:                     

AT4G10240.1     -------------------------IVH-KNPSVILSP----------------------
pt025651_POPTR_ QVPDSSRAVPQIPSPPTASGLYWPKSFHNHSETAIFVPDICCSVVQNCHYSEQRGTVSKR
pt030266_POPTR_ QVPDSSWAVPQIPSPPTASGLYWPKSIH-HSDTAIFVPDICGSAVQNHRHCQQRGTVSKW
                                          .* :. :.*: *                      

AT4G10240.1     ----
pt025651_POPTR_ QRQL
pt030266_POPTR_ RQQL
BoxShade v3.31 C (beta, 970507) Output
AT4G10240.1     M K I Q C E V C E K A E A E V L C C S D E A V L C K P C D I K V H E A N K L F Q R H H R V A L Q K D A A S A T T A S G A
pt025651_POPTR_    M K I Q C N V C E A A E A K V L C C A D E A A L C W T C D E K V H A A N K L A S K H Q R I P L - - - - - - S T S S P Q M
pt030266_POPTR_    M K I Q C N V C E A A E A N V L C C A D E A A L C R A C D E T V H A A N K L A S K H Q R V P L - - - - - - S T S S P Q I
 
AT4G10240.1     P L C D I C Q E R K G Y F F C L E D R A M L C N D C D E A I H T C N S - - - - H Q R F L L S G V Q V S D Q S L T E N S E
pt025651_POPTR_    P K C D I C Q E T A G F F F C L E D R A L L C R K C D V A I H T A N T H V S V H Q R F L L T G V K V G L E P T D P G A S
pt030266_POPTR_    P K C D I C Q E A A G F F F C L E D R A L L C R K C D V A I H T A N T H V S A H Q R F L L T G V K V G L E S T D P G A S
 
AT4G10240.1     C S T - - S F S S E T Y Q I Q S K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt025651_POPTR_    S S S G K S P S G E K K T L E T K S R P V S R R G T L L P L A N P C N Q V S T V N V C G V G D F G P A K L P Y S G G S A
pt030266_POPTR_    S S P G K S P S G E I T T L K T K S C P V S R R G T S M P L A S P C N Q V F P A N V C G V G E F V P A K L P Y S G G S A
 
AT4G10240.1     - - - - - - - - - - - - - - - V S L N S Q Y - - - - - S S E E T E A G N S G E - - - - - - - - - - - - - - - - - - - - -
pt025651_POPTR_    T S S I S Q W H I D E F L D L P E F N Q N Y G Y I D N G S S K A D S G K R G D S D C S A I L R S T E E E V D D E E C L G
pt030266_POPTR_    A S S I S Q W Q I D E F L E L A E F N Q H Y G Y M D N G S S K A D S G K H G D S D C S A I L R S A E E E V D D E E C L G
 
AT4G10240.1     - - - - - - - - - - - - - - - - - - - - - - - - - I V H - K N P S V I L S P - - - - - - - - - - - - - - - - - - - - - -
pt025651_POPTR_    Q V P D S S R A V P Q I P S P P T A S G L Y W P K S F H N H S E T A I F V P D I C C S V V Q N C H Y S E Q R G T V S K R
pt030266_POPTR_    Q V P D S S W A V P Q I P S P P T A S G L Y W P K S I H - H S D T A I F V P D I C G S A V Q N H R H C Q Q R G T V S K W
 
AT4G10240.1     - - - -
pt025651_POPTR_    Q R Q L
pt030266_POPTR_    R Q Q L
 
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