fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G10240.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb016860 not found in 245aa AT1G78600.1 1st_not 0.413173652 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G10240.1     MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTAS--
Sb016860_Sorbi1 MKIGCDACERAEAAVLCCADEAALCRSCDAAVHSANKLAARHHRVALLPSSTAHPPSSTS
                *** *:.**:*** ****:***.**:.**  **.****  *******  .::: ..:*  

AT4G10240.1     ---------------GAPLCDICQERKGYFFCLEDRAMLCNDCDEAIHTC----NSHQRF
Sb016860_Sorbi1 PIADDGSGSGGGGGDGHPACDICQEKTGYFFCLEDRALLCRPCDVAVHAAGVHVSSHRRF
                               * * ******:.**********:**. ** *:*:.    .**:**

AT4G10240.1     LLSGVQVSD-QSLTE-------------------------------NSECSTSFSSETYQ
Sb016860_Sorbi1 LITGVRVGDVESLSHGVPGSDGGASPSTTSSGNGSSNAPGSSSGGGNPTTTTTTTTMPDQ
                *::**:*.* :**:.                               *.  :*: :: . *

AT4G10240.1     IQSKVSLNSQYSSEETEAGNSG-------------------------EIVHKNPSVILSP
Sb016860_Sorbi1 VRPSSSSSIRATAATTAEGSPGQWQQWLWSDFLADDVGGGGGVDMEEECCHAELS---EP
                ::.. * . : ::  *  *..*                         *  * : *   .*

AT4G10240.1     --------
Sb016860_Sorbi1 GSSGLTRS
BoxShade v3.31 C (beta, 970507) Output
AT4G10240.1     M K I Q C E V C E K A E A E V L C C S D E A V L C K P C D I K V H E A N K L F Q R H H R V A L Q K D A A S A T T A S - -
Sb016860_Sorbi1    M K I G C D A C E R A E A A V L C C A D E A A L C R S C D A A V H S A N K L A A R H H R V A L L P S S T A H P P S S T S
 
AT4G10240.1     - - - - - - - - - - - - - - - G A P L C D I C Q E R K G Y F F C L E D R A M L C N D C D E A I H T C - - - - N S H Q R F
Sb016860_Sorbi1    P I A D D G S G S G G G G G D G H P A C D I C Q E K T G Y F F C L E D R A L L C R P C D V A V H A A G V H V S S H R R F
 
AT4G10240.1     L L S G V Q V S D - Q S L T E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N S E C S T S F S S E T Y Q
Sb016860_Sorbi1    L I T G V R V G D V E S L S H G V P G S D G G A S P S T T S S G N G S S N A P G S S S G G G N P T T T T T T T T M P D Q
 
AT4G10240.1     I Q S K V S L N S Q Y S S E E T E A G N S G - - - - - - - - - - - - - - - - - - - - - - - - - E I V H K N P S V I L S P
Sb016860_Sorbi1    V R P S S S S S I R A T A A T T A E G S P G Q W Q Q W L W S D F L A D D V G G G G G V D M E E E C C H A E L S - - - E P
 
AT4G10240.1     - - - - - - - -
Sb016860_Sorbi1    G S S G L T R S
 
0