fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G10240.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024565 not found in 292aa AT1G78600.1 1st_not 0.437125748 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G10240.1     MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA
gm024565_Glyma0 MKIQCNVCEAAEAKVLCCADEAALCWECDEKVHAANKLASKHQRVPL------SLSASHM
                *****:*** ***:****:***.**  ** *** **** .:*:**.*      : :**  

AT4G10240.1     PLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCNS----HQRFLLSGVQVSDQSLTENSE
gm024565_Glyma0 PKCDICQEMVGYFFCLEDRALLCRNCDVSIHTANACVSDHQRFLLTGVRVGLEA-TERGA
                * ******  **********:**.:** :***.*:    ******:**:*. :: **.. 

AT4G10240.1     CSTSFSSETYQ-----IQSKVSLN------------------------------------
gm024565_Glyma0 SSSSVKSQSGEKMSDAKSSSISRNVSSLPQPSNANEVLPLQMQGVEEFPPSNFSGYTSGN
                .*:*..*:: :      .*.:* *                                    

AT4G10240.1     -SQYSSEE----------------TEAGNSGEIVHKNPSV--------------------
gm024565_Glyma0 VSQWPIEEFLGLNELSQYYNYMDGSSKADSGKLGDSDSSVLRSGEEDMDDDGFLGRVPDS
                 **:. **                :. .:**:: ..:.**                    

AT4G10240.1     ------ILSP-------------------------------------------------
gm024565_Glyma0 SWTVPQIPSPPTASGLYWPKVPQYTSDSAMSVPDICFSHVRQPHHAQHNSNVSKRRRQL
                      * **
BoxShade v3.31 C (beta, 970507) Output
AT4G10240.1     M K I Q C E V C E K A E A E V L C C S D E A V L C K P C D I K V H E A N K L F Q R H H R V A L Q K D A A S A T T A S G A
gm024565_Glyma0    M K I Q C N V C E A A E A K V L C C A D E A A L C W E C D E K V H A A N K L A S K H Q R V P L - - - - - - S L S A S H M
 
AT4G10240.1     P L C D I C Q E R K G Y F F C L E D R A M L C N D C D E A I H T C N S - - - - H Q R F L L S G V Q V S D Q S L T E N S E
gm024565_Glyma0    P K C D I C Q E M V G Y F F C L E D R A L L C R N C D V S I H T A N A C V S D H Q R F L L T G V R V G L E A - T E R G A
 
AT4G10240.1     C S T S F S S E T Y Q - - - - - I Q S K V S L N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm024565_Glyma0    S S S S V K S Q S G E K M S D A K S S S I S R N V S S L P Q P S N A N E V L P L Q M Q G V E E F P P S N F S G Y T S G N
 
AT4G10240.1     - S Q Y S S E E - - - - - - - - - - - - - - - - T E A G N S G E I V H K N P S V - - - - - - - - - - - - - - - - - - - -
gm024565_Glyma0    V S Q W P I E E F L G L N E L S Q Y Y N Y M D G S S K A D S G K L G D S D S S V L R S G E E D M D D D G F L G R V P D S
 
AT4G10240.1     - - - - - - I L S P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm024565_Glyma0    S W T V P Q I P S P P T A S G L Y W P K V P Q Y T S D S A M S V P D I C F S H V R Q P H H A Q H N S N V S K R R R Q L
 
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