fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G10240.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034572 not found in 285aa AT1G78600.1 not_not 0.434131736 III
Gm034571 not found in 290aa AT1G78600.1 not_not 0.434131736 III
Gm034570 not found in 294aa AT1G78600.1 not_not 0.434131736 III
Gm037312 not found in 233aa AT1G78600.1 not_not 0.428143712 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G10240.1     ------------------------------------------------------------
gm034570_Glyma1 MNLVAAKNILHFFLLSLLRHFLNPAPLLRGAPNLFFSFFSLSQFQTVDLDTLLEKEVFFE
gm034571_Glyma1 MNLVAAKNILHFFLLSLLRHFLNPAPLLRGAPNLFFSFFSLSQFQTVDLDTLLEKEVFFE
gm037312_Glyma1 ------------------------------------------------------------
gm034572_Glyma1 MNLVAAKNILHFFLLSLLRHFLNPAPLLRGAPNLFFSFFSLSQFQTVDLDTLLEKEVFFE
                                                                            

AT4G10240.1     ----------------------MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKL
gm034570_Glyma1 GKEGIFCVGGWNPEFGLVGVERMKIQCNVCEAAEAKVLCCADEAGLCWECDEKVHAANKL
gm034571_Glyma1 GKEGIFCVGGWNPEFGLVGVERMKIQCNVCEAAEAKVLCCADEAGLCWECDEKVHAANKL
gm037312_Glyma1 ----------------------MKIQCNVCEAAEAKVLCCADEAALCWECDEKVHAANKL
gm034572_Glyma1 GKEGIFCVGGWNPEFGLVGVERMKIQCNVCEAAEAKVLCCADEAGLCWECDEKVHAANKL
                                      *****:*** ***:****:*** **  ** *** ****

AT4G10240.1     FQRHHRVALQKDAASATTASGAPLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCNS---
gm034570_Glyma1 ASKHQRVPL------STSSSHMPKCDICQEALGYFFCLEDRALLCRKCDVAIHTANAYVS
gm034571_Glyma1 ASKHQRVPL------STSSSHMPKCDICQEALGYFFCLEDRALLCRKCDVAIHTANAYVS
gm037312_Glyma1 ASKHQRVPL------STSSSHMPKCDICQEALGYFFCLEDRALLCRKCDVAIHTANAYVS
gm034572_Glyma1 ASKHQRVPL------STSSSHMPKCDICQEALGYFFCLEDRALLCRKCDVAIHTANAYVS
                 .:*:**.*      :*::*  * ******  **********:**..** ****.*:   

AT4G10240.1     -HQRFLLSGVQVSDQSLTENSECSTSFSSET---------YQIQSKVSLNSQYSSEE---
gm034570_Glyma1 GHQRFLLTGVRVGLEA-TDPGASSTSLKSDSGEKVSD---SSVSRKVSTAPQPSNYNEVL
gm034571_Glyma1 GHQRFLLTGVRVGLEA-TDPGASSTSLKSDSGEKVSD---SSVSRKVSTAPQPSNYNEVL
gm037312_Glyma1 GHQRFLLTGVRVGLEA-IDPGASLTSLKSDSGEKVSDTKSSSVSRKVSTVPQPSNYNEVL
gm034572_Glyma1 GHQRFLLTGVRVGLEA-TDPGASSTSLKSDSGEKVSD---SSVSRKVSTAPQPSNYNEVL
                 ******:**:*. ::  : . . **:.*::          .:. ***  .* *. :   

AT4G10240.1     -TEAGNSGEIVHKNPSVILSP---------------------------------------
gm034570_Glyma1 PAEVGGVGEF----PSAKVSFGGGSTAGNISQWTIDEFIGLNEFSQNYDYMEGSSRSSDS
gm034571_Glyma1 PAEVGGVGEF----PSAKVSFGGGSTAGNISQWTIDEFIGLNEFSQNYDYMEGSSRGVKG
gm037312_Glyma1 PIEVGGVGEF----PPAKVSFGGGSTDGNISQWTIDEFIGLNEFSQHYDYMEGSSRS---
gm034572_Glyma1 PAEVGGVGEF----PSAKVSFGGGSTAGNISQWTIDEFIGLNEFSQNYDYMEGSSRVCS-
                  *.*. **:    *.. :*                                        

AT4G10240.1     -----------------------------------
gm034570_Glyma1 SFVIDCVY---------------------------
gm034571_Glyma1 QGWG-------------------------------
gm037312_Glyma1 ------FYHLMLYFFYWVSIPEFRFIFCQRLQAVW
gm034572_Glyma1 -----------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT4G10240.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm034570_Glyma1    M N L V A A K N I L H F F L L S L L R H F L N P A P L L R G A P N L F F S F F S L S Q F Q T V D L D T L L E K E V F F E
gm034571_Glyma1    M N L V A A K N I L H F F L L S L L R H F L N P A P L L R G A P N L F F S F F S L S Q F Q T V D L D T L L E K E V F F E
gm037312_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm034572_Glyma1    M N L V A A K N I L H F F L L S L L R H F L N P A P L L R G A P N L F F S F F S L S Q F Q T V D L D T L L E K E V F F E
 
AT4G10240.1     - - - - - - - - - - - - - - - - - - - - - - M K I Q C E V C E K A E A E V L C C S D E A V L C K P C D I K V H E A N K L
gm034570_Glyma1    G K E G I F C V G G W N P E F G L V G V E R M K I Q C N V C E A A E A K V L C C A D E A G L C W E C D E K V H A A N K L
gm034571_Glyma1    G K E G I F C V G G W N P E F G L V G V E R M K I Q C N V C E A A E A K V L C C A D E A G L C W E C D E K V H A A N K L
gm037312_Glyma1    - - - - - - - - - - - - - - - - - - - - - - M K I Q C N V C E A A E A K V L C C A D E A A L C W E C D E K V H A A N K L
gm034572_Glyma1    G K E G I F C V G G W N P E F G L V G V E R M K I Q C N V C E A A E A K V L C C A D E A G L C W E C D E K V H A A N K L
 
AT4G10240.1     F Q R H H R V A L Q K D A A S A T T A S G A P L C D I C Q E R K G Y F F C L E D R A M L C N D C D E A I H T C N S - - -
gm034570_Glyma1    A S K H Q R V P L - - - - - - S T S S S H M P K C D I C Q E A L G Y F F C L E D R A L L C R K C D V A I H T A N A Y V S
gm034571_Glyma1    A S K H Q R V P L - - - - - - S T S S S H M P K C D I C Q E A L G Y F F C L E D R A L L C R K C D V A I H T A N A Y V S
gm037312_Glyma1    A S K H Q R V P L - - - - - - S T S S S H M P K C D I C Q E A L G Y F F C L E D R A L L C R K C D V A I H T A N A Y V S
gm034572_Glyma1    A S K H Q R V P L - - - - - - S T S S S H M P K C D I C Q E A L G Y F F C L E D R A L L C R K C D V A I H T A N A Y V S
 
AT4G10240.1     - H Q R F L L S G V Q V S D Q S L T E N S E C S T S F S S E T - - - - - - - - - Y Q I Q S K V S L N S Q Y S S E E - - -
gm034570_Glyma1    G H Q R F L L T G V R V G L E A - T D P G A S S T S L K S D S G E K V S D - - - S S V S R K V S T A P Q P S N Y N E V L
gm034571_Glyma1    G H Q R F L L T G V R V G L E A - T D P G A S S T S L K S D S G E K V S D - - - S S V S R K V S T A P Q P S N Y N E V L
gm037312_Glyma1    G H Q R F L L T G V R V G L E A - I D P G A S L T S L K S D S G E K V S D T K S S S V S R K V S T V P Q P S N Y N E V L
gm034572_Glyma1    G H Q R F L L T G V R V G L E A - T D P G A S S T S L K S D S G E K V S D - - - S S V S R K V S T A P Q P S N Y N E V L
 
AT4G10240.1     - T E A G N S G E I V H K N P S V I L S P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm034570_Glyma1    P A E V G G V G E F - - - - P S A K V S F G G G S T A G N I S Q W T I D E F I G L N E F S Q N Y D Y M E G S S R S S D S
gm034571_Glyma1    P A E V G G V G E F - - - - P S A K V S F G G G S T A G N I S Q W T I D E F I G L N E F S Q N Y D Y M E G S S R G V K G
gm037312_Glyma1    P I E V G G V G E F - - - - P P A K V S F G G G S T D G N I S Q W T I D E F I G L N E F S Q H Y D Y M E G S S R S - - -
gm034572_Glyma1    P A E V G G V G E F - - - - P S A K V S F G G G S T A G N I S Q W T I D E F I G L N E F S Q N Y D Y M E G S S R V C S -
 
AT4G10240.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm034570_Glyma1    S F V I D C V Y - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm034571_Glyma1    Q G W G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm037312_Glyma1    - - - - - - F Y H L M L Y F F Y W V S I P E F R F I F C Q R L Q A V W
gm034572_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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