fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G10350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm032208 not found in 318aa AT4G10350.1 not_1st 0.501381215 II
Pt014311 not found in 359aa AT4G10350.1 not_1st 0.602209944 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G10350.1     MGSSSNGGVPPGFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDLNKLEPWDLQERCKI
gm032208_Glyma1 -------------------------------------MDVIREVDLNKMEPWDLQERCRI
pt014311_POPTR_ -MATSTGGVPPGFRFHPTEEELLHYYLKKKVSFQKFDMEVIREVDLNKMEPWELQETCKI
                                                     *:*********:***:*** *:*

AT4G10350.1     GSTPQNEWYFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCIRNSYKKIGMRKTLVFYKG
gm032208_Glyma1 GSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNSYKKIGMRKTLVFYKG
pt014311_POPTR_ GSTPQNEWYFFSHRDRKYPTGSRTNRATNAGFWKATGRDKCIRNTDKKIGMRKTLVFYRG
                *************:**************:***************: ************:*

AT4G10350.1     RAPHGQKTDWIMHEYRLEDADDPQANPSEDGWVVCRVFMKKNLFKVVNEGSS-SINSLDQ
gm032208_Glyma1 RAPHGQKTDWIMHEYRLEDGNDPQGSANEDGWVVCRVFKKKNLFKIVNEGG--STHNPDQ
pt014311_POPTR_ RAPHGQKTDWIMHEYRLEDGDDAQGNAGEDGWVVCRVFKKKNLFKVSNEGGTASMDSSDQ
                *******************.:*.*....********** ******: ***.  * .. **

AT4G10350.1     HNHDASNNNHALQARSFMHRDSPYQLVRNHGA----MTFELNKPDLALH----QYP---P
gm032208_Glyma1 QINNSSNTN----ARS--YRENHYLLHQQQNPRNS-SGLELDKPELALHYPHLQNP-PYS
pt014311_POPTR_ QLHTSSNQS----RTS-MYRDSQYLIRQHHNHGSTQQTFEPNKPELALYHHHMETPHQYS
                : : :** .      *  :*:. * : :::.       :* :**:***:    : *   .

AT4G10350.1     IF--------HKPPSLGFDYS-------------SGLARDSESAASEGLQYQQACEPGLD
gm032208_Glyma1 LFQSQPLLQIQKP--MVYDYS-YTSDTPIMAKQLMTNPRDCES-GSDGLRY-QVSESGME
pt014311_POPTR_ LFPSQTLMPTHKP--LGYDYSALPSESPVMVKQLMSKARDCES-GSESLRY-QACEPGLE
                :*        :**  : :***                .**.** .*:.*:* *..*.*::

AT4G10350.1     VGTCET---VASHNHQQGLG-EWAMMDRLVTCHMGNEDSSRGITYEDGNNNSSSVVQPVP
gm032208_Glyma1 VGSCEPNQEMGTGRGE-GIN-EWGVLDRLVTSHLGNEDSSKGVRFEEANPPSVHQI----
pt014311_POPTR_ VGTCEAPQQMVAGRDEQGMNDQWAV---LVTSHLGNEDSSKGVTFNAANAPSAHPI----
                **:**.   : : . : *:. :*.:   ***.*:******:*: :: .*  *   :    

AT4G10350.1     ATNQLTLRSEMDFWGYSK
gm032208_Glyma1 --NQLSLRGEMDFWAYGK
pt014311_POPTR_ --NQSSLRGEMDFWGYGK
                  ** :**.*****.*.*
BoxShade v3.31 C (beta, 970507) Output
AT4G10350.1     M G S S S N G G V P P G F R F H P T D E E L L H Y Y L K K K I S Y Q K F E M E V I R E V D L N K L E P W D L Q E R C K I
gm032208_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D V I R E V D L N K M E P W D L Q E R C R I
pt014311_POPTR_    - M A T S T G G V P P G F R F H P T E E E L L H Y Y L K K K V S F Q K F D M E V I R E V D L N K M E P W E L Q E T C K I
 
AT4G10350.1     G S T P Q N E W Y F F S H K D R K Y P T G S R T N R A T H A G F W K A T G R D K C I R N S Y K K I G M R K T L V F Y K G
gm032208_Glyma1    G S T P Q N E W Y F F S H K D R K Y P T G S R T N R A T N A G F W K A T G R D K C I R N S Y K K I G M R K T L V F Y K G
pt014311_POPTR_    G S T P Q N E W Y F F S H R D R K Y P T G S R T N R A T N A G F W K A T G R D K C I R N T D K K I G M R K T L V F Y R G
 
AT4G10350.1     R A P H G Q K T D W I M H E Y R L E D A D D P Q A N P S E D G W V V C R V F M K K N L F K V V N E G S S - S I N S L D Q
gm032208_Glyma1    R A P H G Q K T D W I M H E Y R L E D G N D P Q G S A N E D G W V V C R V F K K K N L F K I V N E G G - - S T H N P D Q
pt014311_POPTR_    R A P H G Q K T D W I M H E Y R L E D G D D A Q G N A G E D G W V V C R V F K K K N L F K V S N E G G T A S M D S S D Q
 
AT4G10350.1     H N H D A S N N N H A L Q A R S F M H R D S P Y Q L V R N H G A - - - - M T F E L N K P D L A L H - - - - Q Y P - - - P
gm032208_Glyma1    Q I N N S S N T N - - - - A R S - - Y R E N H Y L L H Q Q Q N P R N S - S G L E L D K P E L A L H Y P H L Q N P - P Y S
pt014311_POPTR_    Q L H T S S N Q S - - - - R T S - M Y R D S Q Y L I R Q H H N H G S T Q Q T F E P N K P E L A L Y H H H M E T P H Q Y S
 
AT4G10350.1     I F - - - - - - - - H K P P S L G F D Y S - - - - - - - - - - - - - S G L A R D S E S A A S E G L Q Y Q Q A C E P G L D
gm032208_Glyma1    L F Q S Q P L L Q I Q K P - - M V Y D Y S - Y T S D T P I M A K Q L M T N P R D C E S - G S D G L R Y - Q V S E S G M E
pt014311_POPTR_    L F P S Q T L M P T H K P - - L G Y D Y S A L P S E S P V M V K Q L M S K A R D C E S - G S E S L R Y - Q A C E P G L E
 
AT4G10350.1     V G T C E T - - - V A S H N H Q Q G L G - E W A M M D R L V T C H M G N E D S S R G I T Y E D G N N N S S S V V Q P V P
gm032208_Glyma1    V G S C E P N Q E M G T G R G E - G I N - E W G V L D R L V T S H L G N E D S S K G V R F E E A N P P S V H Q I - - - -
pt014311_POPTR_    V G T C E A P Q Q M V A G R D E Q G M N D Q W A V - - - L V T S H L G N E D S S K G V T F N A A N A P S A H P I - - - -
 
AT4G10350.1     A T N Q L T L R S E M D F W G Y S K
gm032208_Glyma1    - - N Q L S L R G E M D F W A Y G K
pt014311_POPTR_    - - N Q S S L R G E M D F W G Y G K
 
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