fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G10350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt014311 not found in 359aa AT4G10350.1 not_1st 0.602209944 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G10350.1     MGSSSNGGVPPGFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDLNKLEPWDLQERCKI
pt014311_POPTR_ -MATSTGGVPPGFRFHPTEEELLHYYLKKKVSFQKFDMEVIREVDLNKMEPWELQETCKI
                  ::*.************:***********:*:***:***********:***:*** ***

AT4G10350.1     GSTPQNEWYFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCIRNSYKKIGMRKTLVFYKG
pt014311_POPTR_ GSTPQNEWYFFSHRDRKYPTGSRTNRATNAGFWKATGRDKCIRNTDKKIGMRKTLVFYRG
                *************:**************:***************: ************:*

AT4G10350.1     RAPHGQKTDWIMHEYRLEDADDPQANPSEDGWVVCRVFMKKNLFKVVNE-GSSSINSLDQ
pt014311_POPTR_ RAPHGQKTDWIMHEYRLEDGDDAQGNAGEDGWVVCRVFKKKNLFKVSNEGGTASMDSSDQ
                *******************.**.*.*..********** ******* ** *::*::* **

AT4G10350.1     HNHDASNNNHALQARSFMHRDSPYQLVR---NHGA--MTFELNKPDLAL--------HQY
pt014311_POPTR_ QLHTSSN-----QSRTSMYRDSQY-LIRQHHNHGSTQQTFEPNKPELALYHHHMETPHQY
                : * :**     *:*: *:*** * *:*   ***:   *** ***:***        ***

AT4G10350.1     PPIF--------HKPPSLGFDYSS-------------GLARDSESAASEGLQYQQACEPG
pt014311_POPTR_ -SLFPSQTLMPTHKP--LGYDYSALPSESPVMVKQLMSKARDCES-GSESLRY-QACEPG
                 .:*        ***  **:***:             . ***.** .**.*:* ******

AT4G10350.1     LDVGTCET----VASHNHQQGLGEWAMMDRLVTCHMGNEDSSRGITYEDGNNNSSSVVQP
pt014311_POPTR_ LEVGTCEAPQQMVAGRDEQGMNDQWAV---LVTSHLGNEDSSKGVTFNAANAPSA---HP
                *:*****:    **.::.*   .:**:   ***.*:******:*:*:: .*  *:   :*

AT4G10350.1     VPATNQLTLRSEMDFWGYSK
pt014311_POPTR_ I---NQSSLRGEMDFWGYGK
                :   ** :**.*******.*
BoxShade v3.31 C (beta, 970507) Output
AT4G10350.1     M G S S S N G G V P P G F R F H P T D E E L L H Y Y L K K K I S Y Q K F E M E V I R E V D L N K L E P W D L Q E R C K I
pt014311_POPTR_    - M A T S T G G V P P G F R F H P T E E E L L H Y Y L K K K V S F Q K F D M E V I R E V D L N K M E P W E L Q E T C K I
 
AT4G10350.1     G S T P Q N E W Y F F S H K D R K Y P T G S R T N R A T H A G F W K A T G R D K C I R N S Y K K I G M R K T L V F Y K G
pt014311_POPTR_    G S T P Q N E W Y F F S H R D R K Y P T G S R T N R A T N A G F W K A T G R D K C I R N T D K K I G M R K T L V F Y R G
 
AT4G10350.1     R A P H G Q K T D W I M H E Y R L E D A D D P Q A N P S E D G W V V C R V F M K K N L F K V V N E - G S S S I N S L D Q
pt014311_POPTR_    R A P H G Q K T D W I M H E Y R L E D G D D A Q G N A G E D G W V V C R V F K K K N L F K V S N E G G T A S M D S S D Q
 
AT4G10350.1     H N H D A S N N N H A L Q A R S F M H R D S P Y Q L V R - - - N H G A - - M T F E L N K P D L A L - - - - - - - - H Q Y
pt014311_POPTR_    Q L H T S S N - - - - - Q S R T S M Y R D S Q Y - L I R Q H H N H G S T Q Q T F E P N K P E L A L Y H H H M E T P H Q Y
 
AT4G10350.1     P P I F - - - - - - - - H K P P S L G F D Y S S - - - - - - - - - - - - - G L A R D S E S A A S E G L Q Y Q Q A C E P G
pt014311_POPTR_    - S L F P S Q T L M P T H K P - - L G Y D Y S A L P S E S P V M V K Q L M S K A R D C E S - G S E S L R Y - Q A C E P G
 
AT4G10350.1     L D V G T C E T - - - - V A S H N H Q Q G L G E W A M M D R L V T C H M G N E D S S R G I T Y E D G N N N S S S V V Q P
pt014311_POPTR_    L E V G T C E A P Q Q M V A G R D E Q G M N D Q W A V - - - L V T S H L G N E D S S K G V T F N A A N A P S A - - - H P
 
AT4G10350.1     V P A T N Q L T L R S E M D F W G Y S K
pt014311_POPTR_    I - - - N Q S S L R G E M D F W G Y G K
 
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